Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1955 ATGTCTAAAGTCCTCGGCTTTACTGGAATTGATGATTTTTTTCCCGGGGGGTCAATATATGCTAACCCCAAGGAGCCCAGTCTCTTGTTGTCTCTTGGTCGTCATGTCGATGTATATTTTCCACCTCAGAAGAGATCTCGTATCAGTGCTCCGTTGAAGAGATCGCACATCAATGATCCTTTTCTTCTCAGTGGAGAATGGTTCGAGGCCGAGAAGCAGCAGCAAACATCCATTGAAGATCTGCCAGATGAATGCCTCTTTGAGATCTTCAGAAGGTTGCCTGGAGGTCAAGAGAGGAGCTCATGTGCCTGTGTTTCCAAGCGCTGGCTTTGGCTTTTAAGTAATATTTGCAAGGATGAAATTTGCTGCAATGAAAAGACAAGTTATGAGAATGATGTTACTGGAGAGGAGGCTGATGTTGAGGAATTTGGGGGTGCTGGATATCTCTCCCGAGATTTGGAAGGAAAGAAGGCGACTGATGTTAGACTTGCTGCTATTGCTGTTGGGACAGCTTCTCGTGGTGGATTGGGAAAGCTTTCTATCCGTGGAGGCTATTCAGGTTGTGCGGTGACTAATCTTGGTCTGAGGGCTGTTGCCCATGGATGCCCTTCTTTAAAGGCTCTTTCTCTTTGGAATGTTACCACAATAGATGATGACGGCCTGATTGAGATTGCTAGTGGATGTCACCAGTTAAAGAAGCTTGATCTTTGTTATTGTCCCTCAATATCTGATAAGGCTTTGACTGTACTTGCAAAGAACTGCCCTAATCTGACTGAGTTATCGATTGAATCATGTTCCAGAATTGGAAATGAAGGTCTACAAGCTATTGGGCAGTTTAGCACCAGCCTAAGGTCCTTATCAATCAAAAATTGTGCTTGCGTCGGTGACCAGGGAATTGCAAGCCTTTTTTCATCAGCTGCTGTTCTTCTGACAAAGGTGAAGCTTGAGGCATTGACTATCTCTGACCTCTCTTTAGCTGTTATTGGACATTATGGTAAGGCAGTTATAGATCTTGCCCTTAAACACCTCCCTAATGTTAGTGAGAAAGGGTTCTGGCTCATGGGTAGCGGCCACGGTTTGCAGAAGTTAAACTCACTCTCAATTGCATCCTGCCAAGGAGTTACAGATATTGGACTTGATGCTGTAGGAAGGGGTTGCCCAAATCTCAAGCACCTGTATCTCTGTAAAAGTGCATTTCTATCAGACCATGGGCTGTCCTCGTTTTCCAAAACTGCTTTATCAATTGAGAGCCTAAAATTGGAGGAGTGCCACAGAATCACCCAGCTTGGGCTTTTCGGTGTCCTTTTTAATTGTTGTGCCAAATTGAAGGCCCTTGCACTTATAAGCTGCTTTGGGATTAAGGAGCAGAATCTGGCGTTGCCTTATGTATCTCCTTGCCAATCACTGCAGTCTCTATCAATTTGTAACTGCCCTGGATTTGGTGATGCTACAATGGCCTTACTTGGAAAGCTTTGCCCTCAGTTGCAGTATGTTGAATTGAGCAGACTTGAGGGAGTGACTGATGCGGGGTTCCTCCCAGTGCTTTTGAATTCTGAGGCCGGTCTGGTTAAAGTTAATCTCAGTCACTGCATGAATTTGACAGATAAAGTTGTTTCCTCCGTTGCAAATGAGCATGGCTTGACTCTTGAGGTCTTAAATCTTGATGGTTGTAAAAAGATCAGCGATGTTAGCTTGAAGGCAATTGCTGAAAACTGCCCATTGATCTATGATCTAGATGTGTCTGAGTCTGCAATTACTGATGCTGGTCTCAAAGCCCTGGCGGGTGGTGGCATGTTCCATTTGCAGATCCTGTCCTTGTCAGGTTGCTCTCTTGTTTCAAATAAGAGCCTGCCTGCTTTGCGAAATCTGGGTGAGACCCTTCTGGGATTAAATATACGTAGCTGCAAGGGAATTAACAGCCGTACTGTTGGGAAGCTTGTGGAACAGTTCTGGAGGTGTGATATTCTTGCTTGA 1974 0.4488 MSKVLGFTGIDDFFPGGSIYANPKEPSLLLSLGRHVDVYFPPQKRSRISAPLKRSHINDPFLLSGEWFEAEKQQQTSIEDLPDECLFEIFRRLPGGQERSSCACVSKRWLWLLSNICKDEICCNEKTSYENDVTGEEADVEEFGGAGYLSRDLEGKKATDVRLAAIAVGTASRGGLGKLSIRGGYSGCAVTNLGLRAVAHGCPSLKALSLWNVTTIDDDGLIEIASGCHQLKKLDLCYCPSISDKALTVLAKNCPNLTELSIESCSRIGNEGLQAIGQFSTSLRSLSIKNCACVGDQGIASLFSSAAVLLTKVKLEALTISDLSLAVIGHYGKAVIDLALKHLPNVSEKGFWLMGSGHGLQKLNSLSIASCQGVTDIGLDAVGRGCPNLKHLYLCKSAFLSDHGLSSFSKTALSIESLKLEECHRITQLGLFGVLFNCCAKLKALALISCFGIKEQNLALPYVSPCQSLQSLSICNCPGFGDATMALLGKLCPQLQYVELSRLEGVTDAGFLPVLLNSEAGLVKVNLSHCMNLTDKVVSSVANEHGLTLEVLNLDGCKKISDVSLKAIAENCPLIYDLDVSESAITDAGLKALAGGGMFHLQILSLSGCSLVSNKSLPALRNLGETLLGLNIRSCKGINSRTVGKLVEQFWRCDILA 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1955 657 SMART LRR_CC_2 254 279 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 572 596 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 598 623 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 360 385 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 280 305 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 546 571 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 386 411 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 202 227 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 412 437 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 466 491 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 519 544 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 228 253 IPR006553 -
Mibi08g1955 657 SMART LRR_CC_2 492 517 IPR006553 -
Mibi08g1955 657 FunFam EIN3-binding F-box protein 1 77 114 - -
Mibi08g1955 657 FunFam EIN3-binding F-box protein 1 267 457 - -
Mibi08g1955 657 Gene3D Ribonuclease Inhibitor 459 516 IPR032675 -
Mibi08g1955 657 Gene3D Ribonuclease Inhibitor 579 652 IPR032675 -
Mibi08g1955 657 Gene3D Ribonuclease Inhibitor 517 578 IPR032675 -
Mibi08g1955 657 SUPERFAMILY RNI-like 192 653 - -
Mibi08g1955 657 FunFam EIN3-binding F-box protein 1 518 655 - -
Mibi08g1955 657 Pfam F-box-like 78 109 IPR001810 GO:0005515
Mibi08g1955 657 SMART fbox_2 81 122 IPR001810 GO:0005515
Mibi08g1955 657 Gene3D Ribonuclease Inhibitor 158 251 IPR032675 -
Mibi08g1955 657 FunFam EIN3-binding F-box protein 1 148 266 - -
Mibi08g1955 657 PANTHER UNCHARACTERIZED 360 543 - -
Mibi08g1955 657 Pfam Leucine Rich repeat 578 594 IPR001611 GO:0005515
Mibi08g1955 657 Pfam Leucine Rich repeat 280 302 IPR001611 GO:0005515
Mibi08g1955 657 Pfam Leucine Rich repeat 253 276 IPR001611 GO:0005515
Mibi08g1955 657 Pfam Leucine Rich repeat 548 569 IPR001611 GO:0005515
Mibi08g1955 657 SUPERFAMILY F-box domain 73 115 IPR036047 GO:0005515
Mibi08g1955 657 Gene3D - 70 122 - -
Mibi08g1955 657 Gene3D Ribonuclease Inhibitor 252 458 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1955 Mibi-ChrMibi08 36531528 36534049 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1955 08 36531528 36534049 Mibi05g0725 05 6848702 6851253 CCT
Mibi08g1955 08 36531528 36534049 Mibi08g1955 08 36531528 36534049 ECH