Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0725 ATGTCTAAAGTCATCGGCTTTACCGGAGGTGACGATCTTTGCCCTGGGGGATCAATATACACCAATCCCAAGGAATCTGATCTATTACTGTCTCTTGGCAACCTTGTTGATGTTTACTTTCCTCCTCGGAAGAGATCTCGTGTCACAGCACCTTTTGTTTTTGATGGAGAATGGTTTGAACAGAAGCAGAAGACATCTATCGAAGCTTTGCCTGATGAATGCCTCTTTGAGATCTTTAGAAGGTTGCCTGTAGGCCAAGAAAGGAGTGCATGCGCCTGTGTTTCCAAGCGCTGGCTTATGCTTTTAAGCAGTATCTGTAAGGAGGAAATCTGCAGCCGCAAAATTACAAGCCATGAGAACGAGTTTTGTGAAAAGGAGGCTGATGATCTGGAATTTGGCGGTGATGGTTACCTGTCTAGGAGCTTAGTGGGTAAGAAGGCAACAGATGTTAGACTCGCTGCCATTGCCGTTGGTACTGCTTCTCGTGGAGGACTAGGTAAACTTTCAATCCATGGGAGCAATTCAGATCGTGGGGTGACCAATCTGGGTCTCAAGTCCGTTGCCCATGGCTGCCCTTCTTTAAAGGGGCTTTCACTGTGGGATATTGCTACCATAGGTGATGAAGGCCTCGTTGATATTGCGAATGGATGTCATCAGCTTGAGAAGTTGGACCTTTGCAAGTGCCCGACAATTTCTGACAAGGCTTTGATTGCAGTTGCAAAGAACTGCCCTAATTTGATCGACTTATCCATCGAATCGTGCCCTAAAATTGGTAATGAAGGTCTTCAAGCTATCGGGCAGTTGTGCCCCAATCTGAGGTCTATCTCAATCAATAACTGCGCCTGTGTTGGTGATCAGGGGATTTCAAGCCTGCTCTCTTCACGTTCTTTTGATTTGGAGAAGGTGAAGCTTCAGGGTCTTGCCATTTCTGACCTCTCTCTCGCTGTTATTGGCCACTATGGAAAGGCTGTTACTGATCTTGTCCTGTCCTGCCTCCCAAATGTTGGTGAGAGGGGGTTCTGGGTTATGGGCAATGGCCATGGGTTGCAGAAGCTTAAGTCACTTACAATTGCATCCTGCCCCGGAGTTACAGATGTTGGGCTTGAATCTTTGGGAAAGGGCTGCCCAAATCTCAAACATTTTCACCTTCGTAAATGTGCATTTCTATCGGACAATGGATTGTTATCCTTCACCAAAGCTGCTCTATCACTTGAGAGCCTTCAATTGGAAGAGTGCCACAGGATCACCCAGCTTGGGTTTTTTGGAGTTATTAACTGTAGCACAGGATTGAAGGCTCTTGCCCTCGTAAGCTGCTTTGGATTCAAAGATCTGAATTTGGGATTGCCTCAGGTGTCTCCTTGCAAGTCGCTCCAGTCTCTAACAATCTGTAACTGCCCTGGATTTGGTGATTATACCTTGGCTGTGCTTGGGAAGTTGTGCCCTCAGCTGCAGCATATTGAGTTAAGTCGCCTTGAGGATGTAACAGATGCTGGGTTGCTCCCACTGGTTGAATGCTCTGAGGCCGGTCTGGTTAAGGTCAATCTTAGTGGTTGCATAAATCTGACTGACAAAGTGGTCTTATCAATGACCAATAAGCACGGTTGGACACTCGAGATGCTAAATCTTGATGGCTGTATAAGGATCAGTGATGCTAGCTTGATAGCAATTGCCGGAAATTGCTCATTGCTATCTGATCTCGACATTTCCAAATGCGCAATCACTGATGCTGGAATTGCAGCACTTGGAAGTGCTGACCAACTCAACTTGCAGGTCCTTTCTTTGGCAGGTTGCTCTTCGGTTACAGATAGGAGCCTGTCTAGTTTGACTAAATTGGGCCAGACCCTTTTGGGATTAAATGTCCAGCAATGCAAAGCAATCAGCAGCAGATCTGTTGACGTGCTTGTGGAACTTCTTTGGAGGTGTGAATTCCTCTTCTGA 1938 0.4644 MSKVIGFTGGDDLCPGGSIYTNPKESDLLLSLGNLVDVYFPPRKRSRVTAPFVFDGEWFEQKQKTSIEALPDECLFEIFRRLPVGQERSACACVSKRWLMLLSSICKEEICSRKITSHENEFCEKEADDLEFGGDGYLSRSLVGKKATDVRLAAIAVGTASRGGLGKLSIHGSNSDRGVTNLGLKSVAHGCPSLKGLSLWDIATIGDEGLVDIANGCHQLEKLDLCKCPTISDKALIAVAKNCPNLIDLSIESCPKIGNEGLQAIGQLCPNLRSISINNCACVGDQGISSLLSSRSFDLEKVKLQGLAISDLSLAVIGHYGKAVTDLVLSCLPNVGERGFWVMGNGHGLQKLKSLTIASCPGVTDVGLESLGKGCPNLKHFHLRKCAFLSDNGLLSFTKAALSLESLQLEECHRITQLGFFGVINCSTGLKALALVSCFGFKDLNLGLPQVSPCKSLQSLTICNCPGFGDYTLAVLGKLCPQLQHIELSRLEDVTDAGLLPLVECSEAGLVKVNLSGCINLTDKVVLSMTNKHGWTLEMLNLDGCIRISDASLIAIAGNCSLLSDLDISKCAITDAGIAALGSADQLNLQVLSLAGCSSVTDRSLSSLTKLGQTLLGLNVQQCKAISSRSVDVLVELLWRCEFLF 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0725 645 PANTHER UNCHARACTERIZED 349 527 - -
Mibi05g0725 645 Gene3D Ribonuclease Inhibitor 241 447 IPR032675 -
Mibi05g0725 645 Gene3D Ribonuclease Inhibitor 448 644 IPR032675 -
Mibi05g0725 645 SUPERFAMILY RNI-like 179 642 - -
Mibi05g0725 645 SMART fbox_2 70 111 IPR001810 GO:0005515
Mibi05g0725 645 FunFam EIN3-binding F-box protein 1 506 643 - -
Mibi05g0725 645 Gene3D - 60 112 - -
Mibi05g0725 645 SUPERFAMILY F-box domain 63 104 IPR036047 GO:0005515
Mibi05g0725 645 Gene3D Ribonuclease Inhibitor 147 240 IPR032675 -
Mibi05g0725 645 FunFam EIN3-binding F-box protein 1 60 109 - -
Mibi05g0725 645 Pfam Leucine Rich repeat 242 265 IPR001611 GO:0005515
Mibi05g0725 645 Pfam Leucine Rich repeat 350 371 IPR001611 GO:0005515
Mibi05g0725 645 Pfam Leucine Rich repeat 560 581 IPR001611 GO:0005515
Mibi05g0725 645 Pfam F-box domain 70 105 IPR001810 GO:0005515
Mibi05g0725 645 FunFam EIN3-binding F-box protein 1 256 445 - -
Mibi05g0725 645 SMART LRR_CC_2 560 584 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 243 268 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 269 294 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 191 216 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 480 505 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 349 374 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 401 426 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 375 400 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 454 479 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 586 611 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 507 532 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 217 242 IPR006553 -
Mibi05g0725 645 SMART LRR_CC_2 534 559 IPR006553 -
Mibi05g0725 645 FunFam EIN3-binding F-box protein 1 137 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0725 Mibi-ChrMibi05 6848702 6851253 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1955 08 36531528 36534049 Mibi05g0725 05 6848702 6851253 CCT
Mibi05g0725 05 6848702 6851253 Mibi05g0725 05 6848702 6851253 ECH