Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1886 ATGAAGTTGGGTTCGAAGCCTGATGCTCTTCAAGCTGAGGGGAAATTTATCATCAGGTATGTATCACCTGATCTGGCCACTGATGTCATCATTAATGTTGGTGAAGTGAAGTTTTACCTTCATAAGTTTCCTCTCCTGTCTAAGAGCAATCGACTGCAGAAGCTAGTATCAAAGGCAAATGAAGAAAATTCTGATGAAATATTCATAGCCGATTTTCCTGGAGGGCCTAAAGCCTTTGAAATATGTGCAAAGTTCTGCTATGGAATAACAGTTACTCTTAATGCGTACAACGTTGTGGCTGCCCGTTGTGCAGCCGAGTACCTTGAGATGACTGAGGATATTGACAAAGGTAACTTAATTTTTAAGATTGAGGTGTTCCTAAACTCGAGCATCTTCCGGAGCTGGAAGGACTCCATCATTGTTCTCCAGACTACTAAATCTCTTCTGCCATGGTCTGAGGATTTGAAGATCATTGGAAGATGCATAGATTCCATAGCTTCAAAAACTTCTGTGAACCCAGAACACATCATGTGGTCCTACACATACAACAGGAAACTAAGCGAGCCTGATAAAATTACAGAGGACCAGATGGCATCTCAAGATAAAATGGAGCCAGTTCCTAAGGATTGGTGGGTTGAAGATGTATGTGAGCTGGACGTTGATCTTTACAAACGGGTAATGATTGCTGTAAAAGCGAAGGGGAGAATGGATGGAGGTATAATTGGGGAGGCTCTAAAAGTTTATGCAGTGAGATGGTTGCCTGAATTTGTTGAGGCACTGGCTTCTGATGCTCATGCTCGTAGGAACAAAACCTTAGTAGAAACAATTGTCTGTTTATTGCCATCTGACCATGGTGGAGGCTGTTCATGTAGCTTCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTGGGAGTAGATGATTCGTCAAGAGAAGAATTGATGAAGAGCATTAGCTTCAGATTGCATGAAGCTTCTGTTAAAGACTTGTTGATCCCTGCAAGGCCTCCCCAGACAACCATTTATGATGTTCAATTGGTACAATGTCTCTTGAATGGATGGATGGCTTTTGAAAAGGAAAGTTGCAATACAGAAGTTGACGAGTATGGAGAAAAAGGAAAAATATTAGTGAACATTGGCAAGTTGGTGGATGGTTACCTAGCAGAAATTGCTCATGATTCAAATTTTAGTTTGTCTAGTTTCATTGAATTGTCACAGTCAATTCCAGAGTTTGCTCGATCAAAGCACGATGGTCTCTACCGAGCTATCGACATATACTTGAAGGAGCACCCCGGTTTAACGAAAGCAGAACGGAAGATAATATGTGGTTTGATGGATGTGAAGAAGTTGACAGAGGATGCATCAATGCATGCTGCACAGAATGATCGGCTTCCACTTCGAGTTGTGGTGCAAGTTCTATTCTATGAACAGCTTAGAGCATCAGCCAATGTTCGAGCTCTTGGTGGCAATGAATGTGACGAGGATTATGAGAAAACAGGGGGGGGAGAGAATTGCGAGTCACTCAAAGATCAGATGAACCAAATGAGCGTCAAGGATGAAGAAGAAGAGTTATGTAAGAAAGGGAAACTGAGCAAGAAGAATAGCAAAAGCAGTAAAAGTGGCATGCAACTCCTACCATCTCGATCGAGAAGAATCTTCGATAAGTTGTGGATTGTGGGAAAAGGACAAGGAGAGAATAGGAGCTCGGAGACTTCAGGGAGTTCTAATAGCCCAACATCTGTAGTCCCTGTAGATACCAAATCATCTGGTTCTTCGTCAAGGCAAAGAAGGCATTCTGTATCATAG 1803 0.4215 MKLGSKPDALQAEGKFIIRYVSPDLATDVIINVGEVKFYLHKFPLLSKSNRLQKLVSKANEENSDEIFIADFPGGPKAFEICAKFCYGITVTLNAYNVVAARCAAEYLEMTEDIDKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIIGRCIDSIASKTSVNPEHIMWSYTYNRKLSEPDKITEDQMASQDKMEPVPKDWWVEDVCELDVDLYKRVMIAVKAKGRMDGGIIGEALKVYAVRWLPEFVEALASDAHARRNKTLVETIVCLLPSDHGGGCSCSFLLKLLKVAILVGVDDSSREELMKSISFRLHEASVKDLLIPARPPQTTIYDVQLVQCLLNGWMAFEKESCNTEVDEYGEKGKILVNIGKLVDGYLAEIAHDSNFSLSSFIELSQSIPEFARSKHDGLYRAIDIYLKEHPGLTKAERKIICGLMDVKKLTEDASMHAAQNDRLPLRVVVQVLFYEQLRASANVRALGGNECDEDYEKTGGGENCESLKDQMNQMSVKDEEEELCKKGKLSKKNSKSSKSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPVDTKSSGSSSRQRRHSVS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1886 600 MobiDBLite consensus disorder prediction 563 600 - -
Mibi08g1886 600 Pfam NPH3 family 209 454 IPR027356 -
Mibi08g1886 600 Gene3D Potassium Channel Kv1.1; Chain A 18 117 IPR011333 -
Mibi08g1886 600 Pfam BTB/POZ domain 26 115 IPR000210 GO:0005515
Mibi08g1886 600 CDD BTB_POZ_NPY3-like 19 122 - -
Mibi08g1886 600 ProSiteProfiles BTB domain profile. 27 95 IPR000210 GO:0005515
Mibi08g1886 600 MobiDBLite consensus disorder prediction 561 600 - -
Mibi08g1886 600 MobiDBLite consensus disorder prediction 525 547 - -
Mibi08g1886 600 PANTHER OS12G0117600 PROTEIN 23 552 IPR043454 -
Mibi08g1886 600 SMART BTB_4 27 125 IPR000210 GO:0005515
Mibi08g1886 600 SUPERFAMILY POZ domain 20 113 IPR011333 -
Mibi08g1886 600 ProSiteProfiles NPH3 domain profile. 209 478 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1886 Mibi-ChrMibi08 35714372 35717666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1886 25 477 EF-hand Containing Proteins AT3G44820 34.151 1.76e-91 293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1886 08 35714372 35717666 Mibi05g0780 05 7312306 7318201 CCT
Mibi08g1886 08 35714372 35717666 Mibi08g1886 08 35714372 35717666 ECH