Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0780 ATGCAGATCACCCCAACACTTAACCCCTATCTCTTCTTGGAAGATGTCACAGTTTCGAGCGTAATAATGATTAAGGACCGACTAGCGTGTTTTCGAGTGCATTCTTCTGTGGAACGCCTATTCTCGTTTCTGGTCTACAGTTTTGTAAGCTGGTTTCTGATCTGTGACTTGGCTGCAGCGGAGAAGTTACAGAGTTTGTCGTCTAGCCTGAAGTTGAAGGTGTACTTTCGTGGTTTTTTTGTTCGAAGGAAAATGAAGTTTATGAAGCTGGGTTCTAAGCCTGATGCCTTTCAAGCTGATGGAAAGTCTATCAGGTATGCTTCATCTGAGTTAACTACAGATATTGTCATAAATGTTGGCGAAGTTAAGTTTTACCTCCACAAGTTCCCTTTACTGTCCAAGAGCAATCGATTACAAACACTAGTGTCAAAAGCTAATGAAGAGGATTCTGATGAAATTTTATTGAATGAGTTCCCTGGTGGGGCCAAGGCATTTGAATTATGTGCAAAGTTCTGTTATGGAATGACTGTTACTCTTAGTGCTCACAACATTGTGGCTGTTCGCTGTGCAGCTGAGTATCTTGAAATGACTGAGGATATTGATAGGGGAAACTTAATTTTTAAAATTGAGGTGTTTCTTAACTCGAGCATCTTGCGGAGTTGGAAAGATTCCATAATTGTTCTGCAAACTACTAAATCTTTTCTCCCATGGTCTGAGGATTTGAAGATCATTGGCAGATGTATAGATTCCATAGCTTCTAAAACTTCTGTTGACCCAGCTAACATCACATGGTCCTACACATATAACCGGAAACTAACTGAGCCTGATAGAATTACTGAGCACAAGATGACATATGAAGGGAAAGCTGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGATATTAGTGAGCTGGACATTGATATTTACAAACGAGTAATGGTTACTGTGAAGTCAAAGGGAAGAATGGATGGTACTGTGATTGGGGAGGCACTGAAAACGTATGCAATTAGGTGGTTGCCTGATTCTATTGAGGCCTTGGTTTCTGAAGCTCCTGCCCGAAGAAACAAATTTCTGGTGGAAACGATTGTTTGTCTATTGCCATCTGACAATGCTATGTGTTCTTGTAGTTTCCTTCTGAAACTATTGAAAGTGGCCATACTAGTAGGTGTAGATGAGCTGGTGAGAGAGGAATTAATGAAGAGCACCTGCCTTAAATTGCATGAAGCTTGCGTCAAAGATCTACTGATCCCTGCAAGGCCTCCTCAAACTACCTTATATGATGTTCAGTTGGTACAATGTCTTTTGAATCGATATATGAATGAAAAAGGCATCAGCTACAATTTGGAAATTGCAGAGAAGAAAGATAAAGGACATGATAAAGCTAGTCTTGCACATATGTTCTTGAATATTGGCAACTTGGCGGACAACTTTCTCACAGAAGTTGCATGTGATCCGAATCTCAGCCTTTCTAGTTTTTTTGACTTGTCACAAACGGTTCCTGTGTTTGCTAGACCCAATCATGATGGTCTGTACAGAGCCATTGACATGTACTTGAAGGAGCACCCAAATATGACAAAAGCTGAAAGGAAGAAGCTGTGTGGACTGATGGATGTGAAGAAACTGTCTGTGGATGCATCTATGCATGCTGCACAGAACGAACGGCTTCCACTTCGAGTTGTGGTGCAGGTTCTCTTTTTTGAGCAGGTCAGGGCTGCTGCCAGCGTCCAAGCTCTTGGTAATAAGAATTCACGTAAGCCTTCGTACACAGTGAGCACGGATGAAGAATGTGATAAAATGGTCGTTGAGAAGTGCCAATCCCTGGAGAACCAGATGTGTAATTTGAAGATGAAGGAAGAAGAATTTCCCAAGAATGGGAAACTGAACAAGAATAATAGCAAAAGCAGCAGAAGTGGAATGCAATTACTTCCTTCACGTTCGAGAAGAATATTTGACAAGTTATGGATTGGTGGTGGTAGTAAAGGACAGGGAGAGAGCAGGAGCTCAGAGACATCGGGAAGTTCAAATAGCCCAACATCTATTGTCCCAGGATACACCAAATCATTTGGTACATCTTCTAGAAACAGGAGGCATTCTGTCTCGTGA 2103 0.4161 MQITPTLNPYLFLEDVTVSSVIMIKDRLACFRVHSSVERLFSFLVYSFVSWFLICDLAAAEKLQSLSSSLKLKVYFRGFFVRRKMKFMKLGSKPDAFQADGKSIRYASSELTTDIVINVGEVKFYLHKFPLLSKSNRLQTLVSKANEEDSDEILLNEFPGGAKAFELCAKFCYGMTVTLSAHNIVAVRCAAEYLEMTEDIDRGNLIFKIEVFLNSSILRSWKDSIIVLQTTKSFLPWSEDLKIIGRCIDSIASKTSVDPANITWSYTYNRKLTEPDRITEHKMTYEGKAESVPKDWWVEDISELDIDIYKRVMVTVKSKGRMDGTVIGEALKTYAIRWLPDSIEALVSEAPARRNKFLVETIVCLLPSDNAMCSCSFLLKLLKVAILVGVDELVREELMKSTCLKLHEACVKDLLIPARPPQTTLYDVQLVQCLLNRYMNEKGISYNLEIAEKKDKGHDKASLAHMFLNIGNLADNFLTEVACDPNLSLSSFFDLSQTVPVFARPNHDGLYRAIDMYLKEHPNMTKAERKKLCGLMDVKKLSVDASMHAAQNERLPLRVVVQVLFFEQVRAAASVQALGNKNSRKPSYTVSTDEECDKMVVEKCQSLENQMCNLKMKEEEFPKNGKLNKNNSKSSRSGMQLLPSRSRRIFDKLWIGGGSKGQGESRSSETSGSSNSPTSIVPGYTKSFGTSSRNRRHSVS 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0780 700 ProSiteProfiles IQ motif profile. 67 94 IPR000048 GO:0005515
Mibi05g0780 700 MobiDBLite consensus disorder prediction 661 700 - -
Mibi05g0780 700 SMART BTB_4 113 211 IPR000210 GO:0005515
Mibi05g0780 700 MobiDBLite consensus disorder prediction 623 642 - -
Mibi05g0780 700 Gene3D Potassium Channel Kv1.1; Chain A 96 203 IPR011333 -
Mibi05g0780 700 MobiDBLite consensus disorder prediction 627 642 - -
Mibi05g0780 700 CDD BTB_POZ_NPY3-like 105 208 - -
Mibi05g0780 700 ProSiteProfiles NPH3 domain profile. 295 570 IPR027356 -
Mibi05g0780 700 PANTHER OS12G0117600 PROTEIN 108 637 IPR043454 -
Mibi05g0780 700 ProSiteProfiles BTB domain profile. 113 181 IPR000210 GO:0005515
Mibi05g0780 700 Pfam BTB/POZ domain 109 200 IPR000210 GO:0005515
Mibi05g0780 700 SUPERFAMILY POZ domain 107 199 IPR011333 -
Mibi05g0780 700 MobiDBLite consensus disorder prediction 653 700 - -
Mibi05g0780 700 Pfam NPH3 family 295 546 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0780 Mibi-ChrMibi05 7312306 7318201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0780 92 621 EF-hand Containing Proteins AT3G44820 32.984 6.28e-95 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1886 08 35714372 35717666 Mibi05g0780 05 7312306 7318201 CCT