Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1693 ATGATTCAAGCAATTACGGCCTTTAAAAGGTCCCACACACTCGCTCAAAGATTCCCATCCCCTCCCTTCAGTCTTAACCTCCGTCTAGATTCTACAGTTTCTCTCCCAACCTCATCTCCCATGGCTTCGTCTCCGTCTCCGTCTCCGTCGTCCCCTTCCCTGATGCTCCTGGTACTCGCCGTCCTCTTCACCGTGTCCTCCGCCATGGACATGTCCATCATCTCCTACGACAGAACCCATGGCGAAGAAGGATCTACCTGGAGGAGCGAAGAGGAGGTGAGGGACATGTACGAGCAGTGGCTTTTGAAGCACGGAAGGCTCTACAACGGCTTGGGGGAGAAAGAGAAGAGGTTCCAAATCTTCAGTGACAATCTCAGGTTCATCGATGAGCGTAACGCCGAGAATCGCACCTATAAGCTGGGCTTGAATCGCTTCGCCGATCTGACCAACGAGGAGTTCAGGGCCAAGTATCTTGGAGCCAGGATCGATCACAAGAGGAGGATCGCTAAGACCAGGAGCAACCGTTACGCTCCACGTGTCGGCGACAAGTTGCCGGATTCCGTTGATTGGAGGAAGGAAGGCGCTGTTGTCGAGGTCAAAGACCAAGGAAGTTGCGGGAGCTGCTGGGCTTTTTCAACCGTCGCTGCAGTGGAAGGAATTAACAAGATAGTGACTGGAGATTTAATTTCACTATCAGAGCAAGAGTTGGTCGACTGCGATACATCATATAACGAAGGGTGCAACGGTGGGCTTATGGACTACGGTTTTCAGTTCATCATCAACAACGGCGGCATTGACACCGAAGAAGATTACCCCTATCGCGCCTTTGATGGTAAATGTGACACATACAGGAAAAATGCTAAAGTTGTCTCAATTGATGACTACGAGGACGTTCCTTCCTATGACGAGTTGGCATTAAAAAAGGCTGTTGCAAATCAGCCAGTGAGCGTTGCCATTGAAGGTGGTGGCAGGGAATTCCAATTATATATATCTGGCGTCTTCACGGGAGCTTGTGGAACATCATTAGATCATGGGGTCACAGCTGTAGGATATGGTACAGAAAATGGAGTTGATTACTGGATAGTGAGGAACTCATGGGGCAAGGCCTGGGGAGAGGACGGGTATGTGAGATTGGAACGCAATTTGGATGCAACGAGAACTGGAAAATGTGGAATTGCAATGGAATCATCTTACCCAATCAAGAAAGGACCAAACCCCCCAAACCCTGGACCATCACCTCCCACTCCGGTTAAGCCACCAACTGTTTGCGACAATTACTACAGCTGTGCTCAGAGCACTACTTGCTGTTGTGTATATGAATATGGGAAGTATTGCTTTCAATGGGGATGTTGTCCTCTTGAAGCTGCCACCTGCTGTGATGACCACTCCAGTTGCTGCCCCCACGACTATCCCGTCTGCAACCTTGATGAGGGAACTTGTCTCATGAGCAAGAACAGTCCATTTGGAGTGAAGGCTATGAAGCGCACTCCAGCCAAACCCCACTGGGCTTTAGGGGCTACGAACAAAGTAAGCAGTGCTTAA 1542 0.4987 MIQAITAFKRSHTLAQRFPSPPFSLNLRLDSTVSLPTSSPMASSPSPSPSSPSLMLLVLAVLFTVSSAMDMSIISYDRTHGEEGSTWRSEEEVRDMYEQWLLKHGRLYNGLGEKEKRFQIFSDNLRFIDERNAENRTYKLGLNRFADLTNEEFRAKYLGARIDHKRRIAKTRSNRYAPRVGDKLPDSVDWRKEGAVVEVKDQGSCGSCWAFSTVAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYGFQFIINNGGIDTEEDYPYRAFDGKCDTYRKNAKVVSIDDYEDVPSYDELALKKAVANQPVSVAIEGGGREFQLYISGVFTGACGTSLDHGVTAVGYGTENGVDYWIVRNSWGKAWGEDGYVRLERNLDATRTGKCGIAMESSYPIKKGPNPPNPGPSPPTPVKPPTVCDNYYSCAQSTTCCCVYEYGKYCFQWGCCPLEAATCCDDHSSCCPHDYPVCNLDEGTCLMSKNSPFGVKAMKRTPAKPHWALGATNKVSSA 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1693 513 SMART Inhibitor_I29_2 97 153 IPR013201 -
Mibi08g1693 513 SMART GRAN_2 423 480 IPR000118 -
Mibi08g1693 513 FunFam Cysteine protease 1 72 402 - -
Mibi08g1693 513 SUPERFAMILY Granulin repeat 420 454 - -
Mibi08g1693 513 CDD Peptidase_C1A 185 399 IPR039417 -
Mibi08g1693 513 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 342 352 IPR025660 -
Mibi08g1693 513 Pfam Cathepsin propeptide inhibitor domain (I29) 97 153 IPR013201 -
Mibi08g1693 513 SUPERFAMILY Cysteine proteinases 89 400 IPR038765 -
Mibi08g1693 513 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 89 398 - -
Mibi08g1693 513 SMART pept_c1 184 400 IPR000668 GO:0006508|GO:0008234
Mibi08g1693 513 Pfam Granulin 434 481 IPR000118 -
Mibi08g1693 513 Pfam Papain family cysteine protease 184 400 IPR000668 GO:0006508|GO:0008234
Mibi08g1693 513 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 202 213 IPR000169 -
Mibi08g1693 513 Gene3D Granulin 420 483 IPR037277 -
Mibi08g1693 513 PRINTS Papain cysteine protease (C1) family signature 344 354 IPR000668 GO:0006508|GO:0008234
Mibi08g1693 513 PRINTS Papain cysteine protease (C1) family signature 359 365 IPR000668 GO:0006508|GO:0008234
Mibi08g1693 513 PRINTS Papain cysteine protease (C1) family signature 202 217 IPR000668 GO:0006508|GO:0008234
Mibi08g1693 513 Gene3D Cysteine proteinases 79 402 - -
Mibi08g1693 513 FunFam Cysteine protease 1 420 483 - -
Mibi08g1693 513 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 359 378 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1693 Mibi-ChrMibi08 33627439 33631715 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1693 08 33627439 33631715 Mibi05g0948 05 8823828 8826578 CCT
Mibi08g1693 08 33627439 33631715 Mibi08g1693 08 33627439 33631715 ECH