Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1639 ATGATGCCTGTAATGATGGTTTCCCAGACTTCTCGGCAAGCGAATTGTACCCATCCTGGTATTAGCAAGTCTGTTGTGGCAGATATTGAAGACCAAACAGCACTGCCAGAAACTCAAACGACCATTCTAGATATTGGACATTGTTCTGCTGAGAAGGATGGATCAAATTGTGTTGCTGCTAGTTCATCTAACAGCAGCCTGGGTGACCAAGCTTTAGAAGAGAAAGTTGTGAATGTTGAAGAAGCTTCAAGCACACTGACGTCTCCCAAGTCTGCTCGTGATTGTGTATTTGGAAAAACAAGCAGACAGCCATCACCAAATCCAGAGGAAAAAGATTTCATTATCAGTGACCCTGAAAGTCAAACAGCTGATCCTGATAAGCTGAGAGTGACATTCAGTCCTACAGTTGTCCTTAACAGAAAAGATGGTGGAGACGAAGGCAAGAAGCAGACAAAATCCTTGTCTGATAGCTTGCATTCACTTACTAGTGCTCTGGACCAGCATGATCTCTGCCATCCTTCAATTCATTCACAGGATTCAGCATGCAATATCTTGAAGCGGCCATCATTTGGGAAAGATGTGAAAAGTCCAAAACCAGATGACCAATTATTACCTGAGGAATCATGTTCCAAGGACAGCAATAATTTGGGGGATATTAGAAGTACAACCATAAATCCTCCACACGGTGTCTCATCAGCACGCAAACCTTCCTCCAGTGGGAACTGGAGGCTTTGGCCTTTCTCTTTGAGGAGATCAAATTCTGAAGTGGTCACGGTGCCTGGTGTTGATGACAAAGATAATAATTCTTCAGAGAGTTCAATCAACAAAGATGCAGAGAAAAATGAGCTCAAACCCAAGCTATTGAAAAAGTATATTAGGGCAAAGACACCAACAACTGAACAGCTGGCATCCTTGAATCTAAAGGAAGGGAAAAACACTGTAACCTTCACTTTCTCAGTGGATATGATGGAGAATGAACAGGTCAGACGTTCTAGGTCAGGTCATGCCTTTAGTGGGAGTAGACTGGTCACAGACAGGGGTTGCACATCTATTCTCAGCTATCAAGGCTATCATTTACAGGAAAATGGTTACAAACTACTTTTTCTCAGTGCTCGATCAATTTCTCAGGCCTATCAAACCAGACAATTCCTGGATGGAAAAGTTTTGCCTGATGGTCCTGTAGTTATTTCTCCTGATGGAATTTTTCCCTCTCTATATCGAGAAGGCATTTCAAATGTTTCCTTGGCTATGCCTCTCTCAAAATTATATGAATTAAGACTTCCTGCTTTTCCATTTCCAGTTATTAGAAGGGCCCCTCATGAGTTTAAAATTTCATGCTTGGAGGATATCAAGGCACTGTTTCCTCCTGAATGCAGCCCATTTTATGCCGGCTTCGGAAATAGAGATACTGATGAGATCAGCTACCTCAAAGTTGGAATCCCGAGAGGGAAAATCTTCATTATTAATCCAAGGGTATATCGAGTCCTGTAA 1491 0.4225 MMPVMMVSQTSRQANCTHPGISKSVVADIEDQTALPETQTTILDIGHCSAEKDGSNCVAASSSNSSLGDQALEEKVVNVEEASSTLTSPKSARDCVFGKTSRQPSPNPEEKDFIISDPESQTADPDKLRVTFSPTVVLNRKDGGDEGKKQTKSLSDSLHSLTSALDQHDLCHPSIHSQDSACNILKRPSFGKDVKSPKPDDQLLPEESCSKDSNNLGDIRSTTINPPHGVSSARKPSSSGNWRLWPFSLRRSNSEVVTVPGVDDKDNNSSESSINKDAEKNELKPKLLKKYIRAKTPTTEQLASLNLKEGKNTVTFTFSVDMMENEQVRRSRSGHAFSGSRLVTDRGCTSILSYQGYHLQENGYKLLFLSARSISQAYQTRQFLDGKVLPDGPVVISPDGIFPSLYREGISNVSLAMPLSKLYELRLPAFPFPVIRRAPHEFKISCLEDIKALFPPECSPFYAGFGNRDTDEISYLKVGIPRGKIFIINPRVYRVL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1639 496 Pfam LNS2 (Lipin/Ned1/Smp2) 358 491 IPR013209 -
Mibi08g1639 496 MobiDBLite consensus disorder prediction 258 280 - -
Mibi08g1639 496 PANTHER LIPIN 359 410 IPR026058 -
Mibi08g1639 496 MobiDBLite consensus disorder prediction 208 239 - -
Mibi08g1639 496 MobiDBLite consensus disorder prediction 191 207 - -
Mibi08g1639 496 MobiDBLite consensus disorder prediction 188 239 - -
Mibi08g1639 496 MobiDBLite consensus disorder prediction 80 155 - -
Mibi08g1639 496 SMART lns2 349 495 IPR031315 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1639 Mibi-ChrMibi08 32943216 32946934 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1639 08 32943216 32946934 Mibi05g1008 05 12492833 12504279 CCT
Mibi08g1639 08 32943216 32946934 Mibi08g1639 08 32943216 32946934 ECH