LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi05g1008	ATGTTCTGTTGGATTCTTGTCAACTGGGATGCTTGGATAACTAAGAATTATTATCTGCGTTTTGTAGTTTTTGCCATTCAATCTGCATTGATTTTTCTTCCTTTGATAAGACACCCTATCCAATCTGGCATCTTGCGACTGGGTCCTCATCCTGATCTCTCCTCCATGTCGATTGGATTGACTTATAAGAGGATGCAAGCGATGGAGAGGCTAGGCAGCTATATTAGTAGGAGCGTGAACACTGTTTCTGGCCCTTTTCATCCTTTTGGCGGCGCTGTGGATATTGTTGTAGTTGAGCAGAGAGATGGGAGCTTTAAGTCTTCACCATGGTATGTTCGATTTGGGAAATTTCAAGGCGTTTTGAAGGCAAAGGAGAGAGTTGTCAACATTAGCGTTAATGGAGTGGAAGCTGATTTTCATATGTATTTGGATCATAAAGGAGAAGCATTCTTTATCAGCGAAATGGATGCAGAAGATGGAGAATCTATATTATGTCCATCATCTTCTAGCGATGAGACAGATAGCAGACCTCAGGATAATAAGCGCCTTTTGAAGCCTGAAAGTTGTGATTTTGACACAGAGAAGTCAAATTCAGTTGATCATGTTGATATAAACAATGGTAAACTATTGGCCAAGACCAGTTCTCGTCGATCACGGCTGCTTGGTTTTGTATTTAATCGAAGGTCGGTGAAGGGCGATAATGGCATTCGCAGGGAAGTAGAACTAAACAGGATTGATTCATTGGAGACTGCAGAGATTGCAGCTAACCTATTGGAGTTAAAATGGTCTACCAATCTTGCAGGTCGTGAACCAGCTCGTAAAAATAGCATAAAAACTCAGCAGAGCTTGCCTTTCCACAATAATATTGAGAATGCTTTGGGCCAAAGTATATTAAACGAGGAAGCTTGTTGCTGCTCTAAGCAAGAAGGCATCAATTGTTCCGGATCTGAATTTGAAGAAACTGGCGAGGAGGAGAGGATAAACCCATCATGTTTAAGCATCCAAGACAAAATGGTTGAACATTTTGTTGCGGGTGAAAGCTTTACAGAAGGGAAAACCAAGGAGAGAGCGGAAGTATCAACAATAATTGATGTTGACATGGATACTGAAGTTAACCCAAACGGGAAGGAAATTGCATATGATAGCACTAGTTCTGATTTACAAGTTGCATGTGTAAAGCTCGAAACACACTCTGAAAAGCAGCTGAATGGAGAAGAGGTTTCTGAAATTTCTGGGGAGGAATTTTCAGCAAACGGAGATGGGTCTTTCGCTTATTGCAAAACATCAGAGAGATCGATTATGGGCATGGATTGTTCCACTGATCAACCTCACGGTGTATTTTACCTTTCCAGTAGAGGATGTGAATGTCAACAAGTCCATGTGCAGGCTGAAATTTTGAAAGCCTCAACTATCCTCCTTCCTGAGGTCACAGAAAGTGAGGAAGATGTTAAAAATGTTGATCTCGGGATGCCAGTGGAAGCTTTTGACTTTCATTCTCAAGAAACTGATTTTTTCCATTCTGGTGTTAGTAGTGATGGTGTGGCGAATGCAAAAGACCAAACAAGGATGCCAAATCCTCAAATTTTCAATTTGGATTCTGAACTTTGTTCACTCGATGAGGATCTGTCAAATTGTGTTGCAGCAACTTCCTGTTACAGCTGCCTGGATAACCAAGTCTTGGATGAGAATGAAAAGGAAAATGATGATTCGAGCATGTTATCATCTCCCCAGGTTTCTATTGGCAATTGTGCCCTAAGCAATACTACAAGTAGACCTCCACTAAAAGAAGAAAGTATCCACTCAACTGATATTGATAAACGCCAAATTTCAGATCAGTGTAATGGGTCAATTTCCCCTGATTTTGTAGTTAGTGATGTGGATAGCATTGAAAAAGTGAACCGGATAGTTTATACAAATTGTGATTCATTTTCATCTCCAGAAAGCTCAACCACTAAAAGTGATATGGATGACCTTCGAGAGTTTAGACGAACATGTCCCATAGTTATCCCTGTAAATAAGGCTACTAGGGAGGAAGTTGACCTGCTGACGGGATCCTTGCCCAAGATGTCTTCTCATAGTGACAGTCTTAATAAACCTGATATTTCTCATCCTTTAAGTCAATCACTTGACTCAAAGTCCAAATCGTTGAAGTGGACATCTCCCACCAAGAATTACTTAAAACGTCTGAAATCAGAGGGGGACAAAGAAAACCAGTTATTGAATGAGGAGTTAGGCGACAAGGAGAGCCATAGCTTTTCAGACTTAAAGAATACCGTTCTTAATCCTCCCATTGGAGATCCATTGAGCCTCAACCCTTCTCCTGGTGGAAAATGGGGACTTTGGCCTTTTTCCTTCAGGAGATCAAGATCTGGAAAGGCTGAGCAGCCTGCTCCCAGTGATGCCAAAAATACTACTTTTGGCAATGCTTCAGAGAGTACAATGGGTACTGATGCAGAAAAAAATGAGCTGAAGCCTAATCCAAGAAGAAAAAAGGTTAGGACTAAGACTCCAACGTCTGAACAACTGGCATCCTTAAATCTTAAGAAAGGGAGGAATACAGTAACCTTCACGTTCTCTACTAATATGCTGGGGAAGCAACAGGTTGATGCTCATCTATATTTGTGGAAATGGAACACACGTATAGTGATCTCAGATGTGGATGGGACAATTACAAGGTCAGATGTTCTAGGACAGTTCATGCCTTTGGTTGGAGTAGATTGGTCACAAATGGGGGTTGCTCATTTATACTCAGCTATCAAGGAAAATGATTACCAATTGCTTTTTCTTAGCGCTCGTGCAATATCTCAGGCCTATCACACCAGACAATTTCTATTCAACCTTAGGCAGAATGGAAAAGTCCTACCTGATGGTCCCGTTCTAATATCCCCAGATGGACTATTTCCCTCCCTATATCGAGAAGTTATCAGAAGGGCTCCACATGAATTCAAAATCGCATGCTTAGAGGATATCAAAGCACTTTTTCCTTCAGATTGCAATCCGTTTTATGCTGGCTTTGGAAATAGGGACACTGACGAAATCAGCTACCTTAAGGTTGGAATACCAAAAGGAAAAATCTTCATCATCAATCCAAAGGGAGAGATTGCTGTAAACCGTCGTCTTGATACAAAATCATATACTTCTCTTCATGCCCTTGTAAATGGAATGTTTCCTGCTACGACCTCATCTGAACAGGAGGACTTCAACACCTGGAATTTCTGGAAGCTACCTCCTGTTGCTGTAGATATATGA	3249	0.4118	MFCWILVNWDAWITKNYYLRFVVFAIQSALIFLPLIRHPIQSGILRLGPHPDLSSMSIGLTYKRMQAMERLGSYISRSVNTVSGPFHPFGGAVDIVVVEQRDGSFKSSPWYVRFGKFQGVLKAKERVVNISVNGVEADFHMYLDHKGEAFFISEMDAEDGESILCPSSSSDETDSRPQDNKRLLKPESCDFDTEKSNSVDHVDINNGKLLAKTSSRRSRLLGFVFNRRSVKGDNGIRREVELNRIDSLETAEIAANLLELKWSTNLAGREPARKNSIKTQQSLPFHNNIENALGQSILNEEACCCSKQEGINCSGSEFEETGEEERINPSCLSIQDKMVEHFVAGESFTEGKTKERAEVSTIIDVDMDTEVNPNGKEIAYDSTSSDLQVACVKLETHSEKQLNGEEVSEISGEEFSANGDGSFAYCKTSERSIMGMDCSTDQPHGVFYLSSRGCECQQVHVQAEILKASTILLPEVTESEEDVKNVDLGMPVEAFDFHSQETDFFHSGVSSDGVANAKDQTRMPNPQIFNLDSELCSLDEDLSNCVAATSCYSCLDNQVLDENEKENDDSSMLSSPQVSIGNCALSNTTSRPPLKEESIHSTDIDKRQISDQCNGSISPDFVVSDVDSIEKVNRIVYTNCDSFSSPESSTTKSDMDDLREFRRTCPIVIPVNKATREEVDLLTGSLPKMSSHSDSLNKPDISHPLSQSLDSKSKSLKWTSPTKNYLKRLKSEGDKENQLLNEELGDKESHSFSDLKNTVLNPPIGDPLSLNPSPGGKWGLWPFSFRRSRSGKAEQPAPSDAKNTTFGNASESTMGTDAEKNELKPNPRRKKVRTKTPTSEQLASLNLKKGRNTVTFTFSTNMLGKQQVDAHLYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGVDWSQMGVAHLYSAIKENDYQLLFLSARAISQAYHTRQFLFNLRQNGKVLPDGPVLISPDGLFPSLYREVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPKGEIAVNRRLDTKSYTSLHALVNGMFPATTSSEQEDFNTWNFWKLPPVAVDI	1082

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi05g1008	1082	MobiDBLite	consensus disorder prediction	686	716	-	-
	Mibi05g1008	1082	MobiDBLite	consensus disorder prediction	162	184	-	-
	Mibi05g1008	1082	SMART	lns2	881	1037	IPR031315	-
	Mibi05g1008	1082	Pfam	lipin, N-terminal conserved region	76	159	IPR007651	-
	Mibi05g1008	1082	PANTHER	LIPIN	65	1081	IPR026058	-
	Mibi05g1008	1082	MobiDBLite	consensus disorder prediction	789	841	-	-
	Mibi05g1008	1082	SUPERFAMILY	HAD-like	873	1023	IPR036412	-
	Mibi05g1008	1082	Pfam	LNS2 (Lipin/Ned1/Smp2)	834	1057	IPR013209	-
	Mibi05g1008	1082	MobiDBLite	consensus disorder prediction	797	816	-	-
	Mibi05g1008	1082	MobiDBLite	consensus disorder prediction	685	716	-	-
	Mibi05g1008	1082	MobiDBLite	consensus disorder prediction	563	612	-	-
	Mibi05g1008	1082	MobiDBLite	consensus disorder prediction	570	595	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi05g1008	Mibi-ChrMibi05	12492833	12504279	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi08g1639	08	32943216	32946934	Mibi05g1008	05	12492833	12504279	CCT
	Mibi05g1008	05	12492833	12504279	Mibi05g1008	05	12492833	12504279	ECH