Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g0519 ATGGATCTTCGCATCCATGGCGTCACCACCCTCCTCCTTCTCCTCTCTTCCTTCCCCTTCCTCGCATCTTCTTCTTCTTCTTCCTCCTCCAGTAGTCAAATAAACTCAAACTCAGTCCTTGTGGCTCTTCTGGACTCACATTACACAGATCTCGCAGAGCTCGTAGAGAAAGCCATGCTCCTTCAAACTCTGGAAGAAACCGTGGGTGCCCACAATATCACCATCTTCGCACCAAAAAACGAAGCTTTAGAACGCGATCTCGACCCTGACTTCAAGCGATTCCTTCTCGAACCCAGAAACCTCAAATCCCTTCAATCCCTCCTCATGTTCCACATCATCCCCACCCGAATCGAATCCCTCTCTCAAACCGGCTCAACCCGCCACGAAACTCTCTTCAAATCCCACTTCATTCACCTCAACACCACTAATGCAACCAAACAATGGACCGTAGATCAAGCCAAAATCATCCACCCCTACGTTGTTTCCCGACCAGACGGAGTCATTCATGGCATTGAACGCCTCCTCGTACCTCGTACCGTACAAGACGACTTCAACCGCCGCCGGAATCTTCGGTCAATCACGGCGGTCAAACCGGAGGGAGCGCCCGAGGTTGACCCCAGGACGAACCGGCTGAAGAAGCCTGCGAAGCCGGTCGAACCGGGCTCGCCGCCGGTTTTGCCCATTTACTACGCGATGGCTCCTGGACCGGATCTTGCCCCTGCCCCGGCTCCCGGTCCGGGTGGGCCCCACCATCATTTCAATGGTGAGGCTCAGGTGAAGGATTTTATTCACACGCTTGTTCATTATGGTGGGTACAATGAGATGGCTGACATTTTGGTGAATTTGACTTCGTTAGCTAGTGAGATGGGTAGGTTGGTTTCTGAGGGTTATGTGCTAACTGTTTTGGCTCCCAATGATGAGGCCATGGCTAAGTTGACCACGGACCAGTTGAGTGAACCGGGTGCACCGGAGCAGATAATGTACTACCATATAATTCCTGAGTATCAAACTGAAGAGAGTATGTACAATTCTGTTAGGAGGTTTGGTAAGGTGAGGTATGATACTCTCAGGTTGCCTCATAAGGTGGTTGCTCAGGAAGCAGACGGGTCGGTTAAATTCGGGCAGGGAGACGGGTCGGCTTATTTGTTCGACCCGGATATATATACCGACGGTCGGGTTTCGGTTCAGGGTATCGACGGGGTTTTGTTCCCGCCGGTCGAGGAGGAGGAAAAGCCGGTGACCCGGACGGGTCGACCCGCCAAAGTTGTGGTCAAGCATAGAAGGGGAAAATTGCTGGAAGCTGCCTGCTGGATGCTTGGAACCTTTGGACAGGATTCTAGATTCACCACTTGCCATTCAAGAACCAGTCCTTCGGCTGGCAACATACATATTCACAATTATGTGAGATTCCAACTCAACATTATCTCATGTTCTCTCACTATTGGTGGAAATCCCAAAGATGTAAAAAACTAA 1473 0.5098 MDLRIHGVTTLLLLLSSFPFLASSSSSSSSSSQINSNSVLVALLDSHYTDLAELVEKAMLLQTLEETVGAHNITIFAPKNEALERDLDPDFKRFLLEPRNLKSLQSLLMFHIIPTRIESLSQTGSTRHETLFKSHFIHLNTTNATKQWTVDQAKIIHPYVVSRPDGVIHGIERLLVPRTVQDDFNRRRNLRSITAVKPEGAPEVDPRTNRLKKPAKPVEPGSPPVLPIYYAMAPGPDLAPAPAPGPGGPHHHFNGEAQVKDFIHTLVHYGGYNEMADILVNLTSLASEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRVSVQGIDGVLFPPVEEEEKPVTRTGRPAKVVVKHRRGKLLEAACWMLGTFGQDSRFTTCHSRTSPSAGNIHIHNYVRFQLNIISCSLTIGGNPKDVKN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g0519 490 ProSiteProfiles FAS1/BIgH3 domain profile. 35 175 IPR000782 -
Mibi07g0519 490 SMART fasc_3 300 405 IPR000782 -
Mibi07g0519 490 SMART fasc_3 74 178 IPR000782 -
Mibi07g0519 490 SUPERFAMILY FAS1 domain 239 405 IPR036378 -
Mibi07g0519 490 FunFam Fasciclin-like arabinogalactan protein 16 254 405 - -
Mibi07g0519 490 MobiDBLite consensus disorder prediction 198 220 - -
Mibi07g0519 490 Gene3D FAS1 domain 278 405 IPR036378 -
Mibi07g0519 490 Pfam Fasciclin domain 47 177 IPR000782 -
Mibi07g0519 490 Pfam Fasciclin domain 284 404 IPR000782 -
Mibi07g0519 490 SUPERFAMILY FAS1 domain 38 177 IPR036378 -
Mibi07g0519 490 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 11 449 IPR044654 -
Mibi07g0519 490 Gene3D FAS1 domain 39 178 IPR036378 -
Mibi07g0519 490 ProSiteProfiles FAS1/BIgH3 domain profile. 259 387 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g0519 Mibi-ChrMibi07 6275570 6278629 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0335 01 3287100 3294148 Mibi07g0519 07 6275570 6278629 CCT