Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0335 ATGTTCTTAAAGGCAATTCGCAGTTTTCCGACCTTGGGGGGCATGGAATCTTTTGCTGAGAATTCTGTTACTATTATCACAGTGAAGGAGATAGCCCCAGAGAGAGAGAGAGAGATGACAAGACAAACAGTGCCCTGGGTTTTAGTATATACCCACCAAATCACCAAATTAAGCATCTCAACCCAATTAGCCAACTGGCCCCATTCCTCTCTCTACCTTCTTCTCCCTCGTGCTGTGCTGTATTCCGCCGCATCCCCTCAAGTCGCCATGATTCTTCACATCTACTCCGTCGTCAAGCTCCGTACCTTCCTCCTCCTCCTCCTCCTTTTCGGTTTCCCCCTCGCATTTTCAGAAACACCAAATCCAAATCCAAATCCAAGGTCGTCTTCTTCTTCTTCTTCGGTCAGCTCCGGTCAGATAAACTCCAACTCAGTTCTAGTGGCTCTTCTGGACTCACATTACACAGAACTCGCTGAGCTCGTAGAGAAGGCTATGCTCTTACAGACTCTAGAAGACACTGTCGGCAGCCACAATATCACCATCTTCGCCCCCATCAACCAAGCCCTCGAACGCGATCTCGACCCTCACTTCAAGCGCTTCCTCCTCCAACCCCGTAATCTCATCTCCCTCCAGACCTTACTCTTGTTCCACATCATCCCCACCACAATCGGATCCCACCACCTCCTCCTCCTCACTCGGGCCGGGTCGACCCGTCACAGCACCCTCTCCAACGACCACCTCCATCTCCATCACAATGGCTCCGCGGGAGCGGGATGGACCGTGGATCGGGCCAAGATTATCCAGCCCAATGCGGTCACCCGACCCGATGGAATCATCCACGGCATTGAGCGCCTCTTGGTCCCACGTTCCGTACAAGACGACTTCAACCGCCGCCGAAGCCTCCAGTCTATCGCCGCGGTGAAACCAGAGGCGGCGCCGGAGGTGGACCCCAGGGCTCACCGGTCGAAGAAGCCGGTCCAACCGGGGGAGCCCGGTTCGCCCCCGGCTTTGCCAATCTACGATGCGATGGCCCCCGGGCCCACACTGGCCCCTGCTCCGGCGCCGGGACCGGGTGGACCCCACCACCACTTCAACGGTGAGGCACAGGTGAAGGATTTCATTCAGACATTGCTCCATTACGGTGGATACAATGAAATGGCAGATATATTGGTGAATCTGACGTCATTAGCCACTGAAATGGGTCGATTAGTGTCTGAGGGTTACGTGCTTACAGTTTTGGCTCCAAATGATGAGGCCATGGCTAAATTGACCACCGAGCAATTGAGTGAACCGGGCTCACCGGAGCAGATTGTATATTACCATATGATACCGGAGTATCAAACGGAAGAGAGCATGTACAATGCGGTTAGAAGATTTGGGAAGGTGAGGTATGATACCCTAAGATTGCCGCATAAGGTGGTGGCTGAGGAGGCCGATGGATCCGTGAAATTCGGGCAGGGAGACGGGTCGGCTTATTTGTTCGACCCGGATATCTATACGGATGGGAGGATCTCGGTTCAGGGCATTGATAGCGTGTTGTTCCCACTGGAAGAGAAGGAGACGAAGCCCGTTAACAGAACGGGTCGACCCGCTAAGGTTGTGGTCAAGCACAGAAGAGGAAAATTGCTGGAGGCAGCGTGTTGGGTGCTTGGAACCATTGGACAGCATGGTAGATTTACCACTTGCCTCTGA 1692 0.5372 MFLKAIRSFPTLGGMESFAENSVTIITVKEIAPEREREMTRQTVPWVLVYTHQITKLSISTQLANWPHSSLYLLLPRAVLYSAASPQVAMILHIYSVVKLRTFLLLLLLFGFPLAFSETPNPNPNPRSSSSSSSVSSGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVGSHNITIFAPINQALERDLDPHFKRFLLQPRNLISLQTLLLFHIIPTTIGSHHLLLLTRAGSTRHSTLSNDHLHLHHNGSAGAGWTVDRAKIIQPNAVTRPDGIIHGIERLLVPRSVQDDFNRRRSLQSIAAVKPEAAPEVDPRAHRSKKPVQPGEPGSPPALPIYDAMAPGPTLAPAPAPGPGGPHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGSPEQIVYYHMIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAEEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDSVLFPLEEKETKPVNRTGRPAKVVVKHRRGKLLEAACWVLGTIGQHGRFTTCL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0335 563 Gene3D FAS1 domain 363 515 IPR036378 -
Mibi01g0335 563 SUPERFAMILY FAS1 domain 146 289 IPR036378 -
Mibi01g0335 563 SMART fasc_3 411 516 IPR000782 -
Mibi01g0335 563 SMART fasc_3 180 289 IPR000782 -
Mibi01g0335 563 Gene3D FAS1 domain 145 289 IPR036378 -
Mibi01g0335 563 SUPERFAMILY FAS1 domain 348 516 IPR036378 -
Mibi01g0335 563 FunFam Fasciclin-like arabinogalactan protein 16 365 516 - -
Mibi01g0335 563 MobiDBLite consensus disorder prediction 306 365 - -
Mibi01g0335 563 ProSiteProfiles FAS1/BIgH3 domain profile. 370 498 IPR000782 -
Mibi01g0335 563 Pfam Fasciclin domain 153 288 IPR000782 -
Mibi01g0335 563 Pfam Fasciclin domain 405 515 IPR000782 -
Mibi01g0335 563 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 96 555 IPR044654 -
Mibi01g0335 563 ProSiteProfiles FAS1/BIgH3 domain profile. 141 286 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0335 Mibi-ChrMibi01 3287100 3294148 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0335 01 3287100 3294148 Mibi07g0519 07 6275570 6278629 CCT