Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2769 ATGTCACACGCCCCTCAAACCCTAGCGGCCACCGAATCGGAGCCTGATGAACCTCCTCCTCCTCCTCCCTCCTCCCAAAACCCTACTTCTCCTAATCGCCTAATCAATCATGATTCCGCTCGAATTCCAACCCTCCTTCATACTTCCTTCAATCAGGATTCTGGCTGCTTTGCCGCGGGAACCGACCATGGTTTCCGGATCTACAATTGCGATCCGTTCCGCGAGATCTTTCGCCGGGATTTCGGTGCAGGTGGTGGAATAGGGTTAGTTCAGATGTTGTTTCGCTGCAACATCCTTGCCTTTGTAGGTGGCGGAGCCGACCCTATATACCCTAGTAATAAAGTAATGATTTGGGATGATCATCAGTCACGGTGCATCGGCGAGCTATCGTTTAGATCCGAGGTCAAAGGAGTTCGTCTTAGAAGGGACCGAATTGTGGTGGTTCTGGTGCATAAGATATTCGTCTATAATTTCGCAGATCTTAAATTATTGCACCAAATTGAGACTACGGCCAACCCTAAGGGACTTTGTGAGGTTTCGCATGTTTCAGGGACAATGGTGTTGGTCTGTCCAGGGTTGCAGAAGGGTCAGGTGAGGGTTGAACATTACGTCTCAAAGCGGACCAAGTTTATAATGGCGCACGATTCTAGAATAGCTTGCTTCGCGCTTACGCAGGATGGGAGGCTGCTTGCCACTGCCAGCAGCAAGGGAACTCTGGTCAGGATTTTCAATACATTGGACGGTTCATTACTCCAAGAGGTAAGGAGAGGAGCAGATCGAGCAGAGATATACAGCCTGGCCTTTTCTGCTACTGCGCAGTGGTTAGCTGTCTCAAGTGACAAAGGAACTGTTCATGTCTTCAATCTGAAGGTTGATTCAGGACTATTGGGGCATGAGAGAGTGCAGAGTGCATCTGAATCTAATCCTGCCAATCCGACAGCAGTTTCATCTCTTTCATTTATAAAAGGTGTTCTGCCCAAGTATTTTAGCTCGGAATGGTCTGTGGCACAGTTTCGCTTGCATGAAGGTTTGCAATATATTGTTGCCTTTGGCCATCAGAAGAACACGATTGTAATACTTGGGATGGATGGAAGCTTCTATCGATGTCAGTTTGATCCAGTAAAAGGTGGAGAGATGAGCCAAGTTGAATATTATAACTTCCTGAAGCCAGGAGAAGTATTCTAG 1185 0.4751 MSHAPQTLAATESEPDEPPPPPPSSQNPTSPNRLINHDSARIPTLLHTSFNQDSGCFAAGTDHGFRIYNCDPFREIFRRDFGAGGGIGLVQMLFRCNILAFVGGGADPIYPSNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLVHKIFVYNFADLKLLHQIETTANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYVSKRTKFIMAHDSRIACFALTQDGRLLATASSKGTLVRIFNTLDGSLLQEVRRGADRAEIYSLAFSATAQWLAVSSDKGTVHVFNLKVDSGLLGHERVQSASESNPANPTAVSSLSFIKGVLPKYFSSEWSVAQFRLHEGLQYIVAFGHQKNTIVILGMDGSFYRCQFDPVKGGEMSQVEYYNFLKPGEVF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2769 394 Pfam WD domain, G-beta repeat 257 288 IPR001680 GO:0005515
Mibi06g2769 394 FunFam Autophagy-related protein 18a isoform A 43 373 - -
Mibi06g2769 394 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 43 387 - -
Mibi06g2769 394 SMART WD40_4 204 244 IPR001680 GO:0005515
Mibi06g2769 394 SMART WD40_4 247 288 IPR001680 GO:0005515
Mibi06g2769 394 SMART WD40_4 28 69 IPR001680 GO:0005515
Mibi06g2769 394 MobiDBLite consensus disorder prediction 14 28 - -
Mibi06g2769 394 SUPERFAMILY WD40 repeat-like 31 294 IPR036322 GO:0005515
Mibi06g2769 394 Gene3D - 39 375 IPR015943 GO:0005515
Mibi06g2769 394 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2769 Mibi-ChrMibi06 47414338 47417258 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1731 02 17752607 17756629 Mibi06g2769 06 47414338 47417258 CCT
Mibi06g2769 06 47414338 47417258 Mibi06g2769 06 47414338 47417258 ECH
Mibi02g0457 02 4495172 4497435 Mibi06g2769 06 47414338 47417258 ECH