Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0457 ATGGCTCCCGTCTCTGACACCTGTTCACCTCCATGGGATTCTCCCACCGAAATTCATAAAGAAGTATCCCCTGATGATGATGATAGTCCACCACCACCACCACCACAGGTTCTTGCTCCGACGCCCCCTACTCTGCTTCATCTCTCTTTCAACCAAGATCATTGTTGCTTCGCCGCCGCCACTGACAACGGCTTTCGTATCTACGATTGCCATCCGTTTCGTGAGCTAATCCGCAGAGAGTTTGGTGGAGGCAACGCCACTACTGGCGGCTTCATTCTTGTGGAAATGATCTTTCGCTGTAATGTGCTTGCACTCGTTGGAGATGGCACCCATCCCCAATACCCTCCCACCAAGGTCGTCATCTGGGATGATTACAGAAACGAGTGCAATCGCCAGCTTCCTTTCCCATCAATTGTTCTCGCTGTCCGCCTCCGAAGAGACCGAATCATTGTGGTTGTGGAGCAGATGGTTTTTGTGTACAATTTCCATGACTACAAGTTACTTCATCAGATTGAGACCATTGCTAACCCGAGGGGGCTCTGTGTAGTGTCGCAATCGCCTGATTCTATTCTATTGGCCTGCCCTGGTTTGCGTAGGGGTCAGATACGGGTTGAGCATTATTCAAAGAGAATAACCAATTACATCTGGGCTCATGATTCAGCCATCGCTTGTTTAGCTCTTACACTTGATGGCCTCTTTCTTGCCACCGCCAGTACCAAGGGTACTTTAATTCGAATTTTTGATACAAACAACGGCTCCATGCTTCAAGAAGTAAGAAGGGGTGCAAACCCGGCAGTGGTCTATAGTTTGGCGTTCTCTTCTACTGCTCAGTGGTTTGCTGTCACAAGTGATAAGGGTACTGTCCATGTTTTCAGCCGTAGGGCTAACTCTAGTTCTTCTCAGCGTGGAAATTCACAGACTACGACTGATTCTCGTGCTGCCAGTGCACCGTCAAGCTCACCCCTTGGATTGGGTAAATTTAAAGAAGTGTTACCCAAGTATTTTTATTCGCAGCGGTCACTTGCTCAGTTTCACTTACATGAGGGCACTCATTACACTGTTGCATTTGGTCAGCAAAGCAATATGGTCATGATTCTTGGGATGGATGGGAGTTTCTACCGGTTTCAGTTTGATCCAGAGCATGGTGGTGATATGATTGTACGGGAATTCCATAACTTCTTGGTGCCAGGGACGGCCTCGTGA 1203 0.4821 MAPVSDTCSPPWDSPTEIHKEVSPDDDDSPPPPPPQVLAPTPPTLLHLSFNQDHCCFAAATDNGFRIYDCHPFRELIRREFGGGNATTGGFILVEMIFRCNVLALVGDGTHPQYPPTKVVIWDDYRNECNRQLPFPSIVLAVRLRRDRIIVVVEQMVFVYNFHDYKLLHQIETIANPRGLCVVSQSPDSILLACPGLRRGQIRVEHYSKRITNYIWAHDSAIACLALTLDGLFLATASTKGTLIRIFDTNNGSMLQEVRRGANPAVVYSLAFSSTAQWFAVTSDKGTVHVFSRRANSSSSQRGNSQTTTDSRAASAPSSSPLGLGKFKEVLPKYFYSQRSLAQFHLHEGTHYTVAFGQQSNMVMILGMDGSFYRFQFDPEHGGDMIVREFHNFLVPGTAS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0457 400 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 40 394 - -
Mibi02g0457 400 MobiDBLite consensus disorder prediction 292 318 - -
Mibi02g0457 400 SMART WD40_4 251 292 IPR001680 GO:0005515
Mibi02g0457 400 SMART WD40_4 208 248 IPR001680 GO:0005515
Mibi02g0457 400 SMART WD40_4 337 376 IPR001680 GO:0005515
Mibi02g0457 400 SMART WD40_4 31 69 IPR001680 GO:0005515
Mibi02g0457 400 Pfam WD domain, G-beta repeat 260 291 IPR001680 GO:0005515
Mibi02g0457 400 MobiDBLite consensus disorder prediction 1 43 - -
Mibi02g0457 400 MobiDBLite consensus disorder prediction 292 320 - -
Mibi02g0457 400 Gene3D - 40 384 IPR015943 GO:0005515
Mibi02g0457 400 SUPERFAMILY WD40 repeat-like 31 377 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0457 Mibi-ChrMibi02 4495172 4497435 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0457 02 4495172 4497435 Mibi02g0457 02 4495172 4497435 ECH
Mibi02g0457 02 4495172 4497435 Mibi06g2769 06 47414338 47417258 ECH