Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2339 ATGGAGCAAGTGTTGGAGCTTACGCGCTCCAAGGACACTAAGGAGAGGATGGCCGGCGTTGAGCGCCTTTATCAACTGCTGGAAGCTTCGAGAAAGAGCCTCTCTTCATCTGAGGTTACTTCCCTTGTTGACTGTTGCTTGGATCTTTTGAAAGATAACAACTTCAAGGTCTCTCAGGGCGCTCTTCAAGCTTTGGCCTCTGCCGTCATTCTGTCCGGCGATCATTTTAAACTTCATTTTGATTCGCTTGTTCCCGCCGTCGTTGATCGCTTAGGCGACGGCAAACAGCCAGTTCGTGATGCCGCTAGAAGGCTCTTGCTCACTCTTATGGAGGTTTCTTCCCCTACAATAATTGTTGAAAGAGCAGGATTCTTTGCTTGGACACACAGAAGCTGGAGAGTTAGGGAGGAGTTTGCTCGAACCGTCACATCTGCAATTGGTCTATTTTCATCAACTGAGCTAACCCTTCAACGTGCTATTCTTCCTTCACTTTTGCAGTTGCTAAATGATCCAAATCCCGGTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCACAAGCTGGTCCTCAATTTCGTGATGAGCTTCAGCGCTTCAACCTTCCTTCTTCTTTGGTGAAAGATATTAATGCTAGGCTAGAGGGCATTCAACCAAAAGTACATTCTTCTGATGGCATACCTGGTGGTTTTGTTGCTGGAGAAATTAAACCTTTAAGCATTACTTCCAAGAAAAGCAGCCCAAAAACTAAAAGTTCATCAAGAGAAAACTCTATTTTTTCAGGAAATGGTGATGTCAGAGAGAAATCCATAGATTCTATCAAGGTGTACTCAGAGAAGGAGTTAATCAGGGAAATTGATAAGATTGCATCTACCCTCGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCTATGCAGAGAATTGAAGGCCTTGTTTTGGGAGGTGCTGCTGACTATCCATGTTTGCGAGGGCTCCTGAAGCAACTTGTTGGACCTTTAACCACTCAATTATCAGATCGAAGGTCTAGCATTGTGAAGCAGGCTTGCCATTTATTGTGCTTTTTGTCAAAAGAGCTCCTGGGTGATTTTGAAGTTTGTGCTGAGATGTTCATACCTGTCCTTTTTAAGCTGGTTGTGATCACTGTACTGGTAATTGCAGAGTCCGCCGATAACTGCATAAAGACGATGTTGCGTAACTGCAAAGTTGCCCGAGTGCTTCCTGTAATAGCTGATTGTGCAAAGAAGGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGATATTGGAGCAATGGCCTGATGAACCAGAAATACAGCGATCAGCTGATACATATGAGGATCTGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGTTATAGACTATTTGCAAAAACATGGCCCGAACGTTCCCGTCGCCTATTTTCATCCTTTGATCCAGTCATTCAGAGGTTAATAAATGAAGAGGATGGAGGAGTACATAAGCGCCCTGCTTCACCTTCCATCCGTGACAGAGGTGCATTGGTGTCATTGGCTAGCCAATCCTCTGCTCCTTCTAATCTACCTGGATATGGAACTTCTGCGATTGTTGCAATGGACAGGAGTTCAAGTTTATCATCAGGGACATCTGTCTCCTCTGGTTTACTTCTTTCGCAGGCAAAATCACTTGGTAAAGGTGCAGAACCTAGTTTAGAAAGTGTGTTGCATTCTAGCAAACAGAAGGTCACCGCCATTGAAAGCTTGCTCAGAGGCATGGATTTGTCTAATAAGCATAGTTCTGCTTTCCGGTCATCCAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGTGGTTCCAGCATCTAATAATCTGACAAACTCTTTCACAACTGACTCGATTGTATCTGGTGTCACTAAAGGTAGTAACCGAAATGGTGGCTTGGGTCTGTCTGACATAATTTCACAAATTCAAGCTTCCAGAAATTCTAGTAAGTTATCATATAATAGTAATGCTAGCATTGATCCTCCATCTGCGCTTTCATCATACTCAAGTAAAAGGGCTTCTGAAAGATTACAAGAAAGAAATTCTATTGATGACAATGGCAACAATAGGGAGGCTAGGTGGGCTATGACCCACCGCATTGATAGGCAGTATTTGGATACTCCTTTTAGAGAAACAAGCTTTAGGGATTCACAGAATAGTTATGTGCCTAATTTCCAGAGGCCGCTAGTGAGAAAGAATGTATCTGGGCGTGTCTCTGCTGGCCGGAGGAGAAGTTTTGATGATAACCAACTTTCTCTGGGAGAAGTGTCAAATAATGCTGGTGGACCAGTATCTCTCCCTGAAGCTCTGAGTGAGGGGCTTAGTTCAGGTTCTAACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACACCTTGTTGCAGCAAGGTTCAAAGGGAATTCAGGAAGTGGTCCAGAATTTTGAAAAGGTAATGAAGTTGTTTTTTCAGCACTTGGATGATCCTCACCATAAAGTTGCGCAAGCTGCTCTTTCATCACTTGCAGATATTGTTCCAGCCTGCCGAAAGCCATTTGAGAGTTACATGGAAAGAATGTTACCCCATGTGTTTTCTCGGTTAATTGACCCAAAAGAACTTGTCAGGCAAACATGCTCAATGACATTGGAAGTTGTTAGCAAAACATACAGTATAGATTCTCTTTTACCTGCATTACTACGTTCACTCGATGAACAAAGGTCTCCTAAGGCTAAATTGGCTGTTATTGAGTTTGCAGTCGGTTCCTTAAACAAGCATTCACTGAATCCAGAAGGTGCTGCCAATACTGGCATTCTGAAATCATGGCTTACCAAGTTAACTCCTTTGGTTCATGACAAAAATACAAAGCTCAGAGAAGCGGCCATTACATGCATTATATCAGTGTACACTCACTTTGATTCAGCTGCACTTCTAAATTTTATCCTTAGTTTGTCAGTTGAAGAACAGAATTCATTGAGACGAGCCCTTAAACAATATACTCCTCGGATTGAAGTGGATCTAATAAACTATTTGCAGAGCAAGAAGGAGCGACAACGCTCTAAGTCTTCATATGATATATCTGAGGTTGGAACATCCTCTGAAGATGGATATGTTGGTTTCTCTAGGAAAACTAGTTACCTTGGAAGGTATTCCTCTGGTTCTCTTGATGGTGATGGTGGTAGGAAGTGGAGTTCCTACGATTCAACTCTGGTTAAGGCCAGTTTTTGCCAAGCAGCTTCTGGTGAAAATCAGGAACATTCATATCAAAATCATGAAACTGATTCTACTAGCGGTATTCTTGACTTGAAGACTAAAGATCTTGTTTATACAGCCAATTCAATGGGCCAAAACTTTGGCTCTCATAACAGTCAACCCAGACATGCAGATGGTAGCATGGACTTTGAGGGTGTAACAACTCATCTGGATGTTAATGGTCGGATGTCCTTAGAACATTTAAATTTAAATGCAGACATTGGATATGAAAATGACCCTCCAGAATTGGATCTTGATCATCACTCAACTGAAGTTGTGAAGAATAACTCGAAAGATTCAGGGCCTGGCATTGCTCAAATTCTTGATCTGATATGCAGCGGGGGCAATGGGAGTCCTATTTCACGCAAGCAAACTGCACTTCAACGGTTAATTGAAGTTTCTACAGAAAATGATTGTTGTATTTGGACAAAGTATTTCAATCAGATTCTGAAAGTTGTGCTTGAAGTGCTGGATGATTCAGATTCCCCAGTTAGAGAGCTTGCTCTCTCAGTTGTAGTTGAAATGTTAAAAAACCAGAAAAATGCGATGGAAGAGTCAATTGAGACAGTAATTGAAAAGCTGCTTCATGCTACAAAGGATACTGTACCCAAGGTCTCAAATGAAGCTGATCACTGCCTGACTATTGTTTTGTCTCAGTGTGATCCTTTCAGATGTTTGAGTGTTATTGTTCCTTTACTGGTTACTGAAGATGAGAAAAACCTTGTTACTTGCATAAATTGCTTGACAAAGCTCATTGGCCGGCTATCTCAGGAGGAATTGATGGTTCAGTTGCCCTCCTTCCTGCCTCCTCTTTTTGATGCTTTTGGAAACCAGAGTGCGGATGTTCGTAAGACAGTTGTGTTCTGTCTAGTGGATATATACATCATGCTCGGGAAAGCATTCTTGCCATACCTCCAAGGTCTTAATAGCACGCAGTTGAAGTTGGTCACTATTTATGCAAATCGAATCTCACAGGCCAGGACCGGCACTCCTATCGACTCCACTCAATGA 4323 0.4256 MEQVLELTRSKDTKERMAGVERLYQLLEASRKSLSSSEVTSLVDCCLDLLKDNNFKVSQGALQALASAVILSGDHFKLHFDSLVPAVVDRLGDGKQPVRDAARRLLLTLMEVSSPTIIVERAGFFAWTHRSWRVREEFARTVTSAIGLFSSTELTLQRAILPSLLQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELQRFNLPSSLVKDINARLEGIQPKVHSSDGIPGGFVAGEIKPLSITSKKSSPKTKSSSRENSIFSGNGDVREKSIDSIKVYSEKELIREIDKIASTLVPEKDWSIRIAAMQRIEGLVLGGAADYPCLRGLLKQLVGPLTTQLSDRRSSIVKQACHLLCFLSKELLGDFEVCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPVIADCAKKDRNAVLRARCCEYALLILEQWPDEPEIQRSADTYEDLIRCCVSDAMSEVRSTARMCYRLFAKTWPERSRRLFSSFDPVIQRLINEEDGGVHKRPASPSIRDRGALVSLASQSSAPSNLPGYGTSAIVAMDRSSSLSSGTSVSSGLLLSQAKSLGKGAEPSLESVLHSSKQKVTAIESLLRGMDLSNKHSSAFRSSSLDLGVDPPSSRDPPFPAVVPASNNLTNSFTTDSIVSGVTKGSNRNGGLGLSDIISQIQASRNSSKLSYNSNASIDPPSALSSYSSKRASERLQERNSIDDNGNNREARWAMTHRIDRQYLDTPFRETSFRDSQNSYVPNFQRPLVRKNVSGRVSAGRRRSFDDNQLSLGEVSNNAGGPVSLPEALSEGLSSGSNWSARVAAFNYLHTLLQQGSKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSSLADIVPACRKPFESYMERMLPHVFSRLIDPKELVRQTCSMTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAVGSLNKHSLNPEGAANTGILKSWLTKLTPLVHDKNTKLREAAITCIISVYTHFDSAALLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQSKKERQRSKSSYDISEVGTSSEDGYVGFSRKTSYLGRYSSGSLDGDGGRKWSSYDSTLVKASFCQAASGENQEHSYQNHETDSTSGILDLKTKDLVYTANSMGQNFGSHNSQPRHADGSMDFEGVTTHLDVNGRMSLEHLNLNADIGYENDPPELDLDHHSTEVVKNNSKDSGPGIAQILDLICSGGNGSPISRKQTALQRLIEVSTENDCCIWTKYFNQILKVVLEVLDDSDSPVRELALSVVVEMLKNQKNAMEESIETVIEKLLHATKDTVPKVSNEADHCLTIVLSQCDPFRCLSVIVPLLVTEDEKNLVTCINCLTKLIGRLSQEELMVQLPSFLPPLFDAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGTPIDSTQ 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2339 1440 Coils Coil 1277 1297 - -
Mibi06g2339 1440 MobiDBLite consensus disorder prediction 701 718 - -
Mibi06g2339 1440 MobiDBLite consensus disorder prediction 243 263 - -
Mibi06g2339 1440 Gene3D - 1 223 IPR011989 -
Mibi06g2339 1440 SMART TOG_3 3 224 IPR034085 -
Mibi06g2339 1440 SMART TOG_3 1203 1433 IPR034085 -
Mibi06g2339 1440 SMART TOG_3 282 513 IPR034085 -
Mibi06g2339 1440 SMART TOG_3 780 1029 IPR034085 -
Mibi06g2339 1440 Gene3D - 267 506 IPR011989 -
Mibi06g2339 1440 MobiDBLite consensus disorder prediction 611 630 - -
Mibi06g2339 1440 SUPERFAMILY ARM repeat 288 1431 IPR016024 -
Mibi06g2339 1440 MobiDBLite consensus disorder prediction 674 718 - -
Mibi06g2339 1440 Gene3D - 797 1020 IPR011989 -
Mibi06g2339 1440 MobiDBLite consensus disorder prediction 674 700 - -
Mibi06g2339 1440 PANTHER CLASP 32 1427 - -
Mibi06g2339 1440 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Mibi06g2339 1440 Pfam CLASP N terminal 804 996 IPR024395 -
Mibi06g2339 1440 Pfam CLASP N terminal 285 500 IPR024395 -
Mibi06g2339 1440 Pfam CLASP N terminal 57 188 IPR024395 -
Mibi06g2339 1440 FunFam Protein peg1 266 513 - -
Mibi06g2339 1440 Gene3D - 1222 1428 IPR011989 -
Mibi06g2339 1440 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Mibi06g2339 1440 SUPERFAMILY ARM repeat 2 402 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2339 Mibi-ChrMibi06 43625845 43637999 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1520 02 15111132 15123489 Mibi06g2339 06 43625845 43637999 CCT
Mibi06g2339 06 43625845 43637999 Mibi06g2339 06 43625845 43637999 ECH