Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1520 ATGGAGGAAGCGCTGGAACTTGCGCGCACCAAGGACACTAAGGAGAGGATGGCAGGGGTGGAGCGCCTTCATCAACTTCTAGAAGCTTCCAGAAAGAGCCTCACTTCATCCGAGGTTACTTCCCTCGTCGATTGTTGCTTGGATCTCTTGAAAGACAACAATTTTCGGGTCTCTCAGGGTGCACTTCAATCTTTGGCCTCTGCTGCTGTGCTCTCTGGCGAGCATTTCAAACTTCACTTCAATGCGCTTGTTCCTGCCGTCGTTGATCGCTTAGGGGATGCCAAGCAACCAGTTCGTGACGCTGCCAGAAGACTCTTGCTTACTCTCATGGAGGTTTCGTCTCCCACAATAATTGTGGAAAGAGCTGGTTCCTTTGCCTGGACACATAAGAGTTGGAGAGTCAGAGAGGAGTTTGCACGGACTGTCACCTCTGCAATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGGGCTATTCTTCCTCCAATTTTGCAGTTGCTCAATGATCCGAACCCTGGTGTCAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCTCAAGCTGGACCTCAATTTCGGGATGAACTTCACCGTCACAATCTTCCATCATCTATGGTTAAAGATATTAATGCTAGGCTTGAGGGCATTCAGCCTAAGATTCGTTCTTCAGATGGTATTGGAAGTGGTTTTATTGCTGGGGAAATTAAATCTTCGAGTGTTAATCCCAAGAAAAGTAGTCCAAAAGCTAAAAGTTCATCAAGGGAGACATCACTTTTTGGAGGAGAAGGTGATCTCACAGAGAGACCCATTGATCCTGTCAAGGTTTATTCTGAGAAGGAGTTAATCCGGGAAATTGAAAAAATTGCATCAACCCTTGTGCCAGAAAAGGACTGGTCAATTCGAATTGGTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGCGCTGCCGACTATCCAAGCTTCCGGGGACTCTTGAAGCAACTTGTTGGACCTCTAAGTGTGCAATTATCTGATCGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTACTATGCTTTTTGTCAAAGGATCTCTTGGGTGATTTTGAACAATGCGCTGAAATGTTCATACCGGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTGATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGTAACTGTAAAGTTGCTCGTGTGCTTCCTCGTATAGCTGAATGTGCAAAGAGTGATCGCAATGCTGTACTTCGTGCTAGGTGTTGTGAATATGCTCTTTTGATATTAGAAAATTGGCCTGATGCTCCAGAAATACTGCGATTGGCTGATTTATACGAGGATTTGATAAAGTGTTGTGTATCAGATGCAATGAGTGAGGTTCGGTCAACTGCAAGGATGTGCTATAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGCCGCCTATTTTCATCCTTTGATCCTGTTATTCAAAGGTTGATAAATGAAGAGGATGGAGGAATACATAGGCGGCATGCCTCACCTTCCATCCGTGATAGAGGTGCATTGCTTTCATTAAGTAATCAAGCTTCTGCTCCTTCAAGTCTACCTGGATATGGGACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTATATCATCAGGGGCATCTGTTTCCTCTGGCATTACTCAGGCAAAGTCACTTGGTAAAGGTGCAGAGCGTAGCTTGGAAAGTGTGTTGCATGCTAGCAAACAGAAGGTCACAGCTATTGAAAGTATGCTCAGAGGTTTGGATTTATCTGATAAGCATAACTCATCAGCCTTTCGCTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATCACTTGACAAACTCTGCAACTACAGAATCAGCTGCTTCTGGTGTCAATAAAGGTTCTAATCGAAATGGTGGTTTGGGTTTGTCTGATATAATTACTCAAATTCAAGCTTCCAAAGATTCTGGCAAGTTATCATGTCATGGTAATGCTACTATGGATCCTGCATCAGCACTTACATCATACTCCAGTAAAAGGGCTTCTGAAAGGCTTCAAGATAGAAGCTCTGTTGATGACATCAATGACATTAGGGAGGCTAGGCGGTTTATGAACCCCCACATTGATAGGCAGTATATGGAAGCAACATATAAAGACGGTTACTTTAGGGATTCACAAAATAGTCATGTGCCTAATTTCCAGAGACCATTGTTGAGGAAAAATGTAGCTGGGCGAATGTCTGTTGGAAGGAGGAGGAGTTTTGATGATAGCCAACTATCCCTTGGAGAGTCATCCAATTATACAGATGGACCAGCATCTCTTCATGAAGCCTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACTCATTGTTACAGCTAGGTCCAAAGGGGATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGCTTTTTTTTCAGCACTTGGATGATCCACACCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCCGATATTATCCCAGCATGCCGAAAGCCCTTTGAGAGTTACATGGAAAGAATATTACCTCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTTAGGCAACCAAGCTCAATGACTTTGGAAGTTGTTAGCAAAACGTACAGTGTCGATTCTCTTTTACCTGCATTGCTCCGCTCACTTGATGAACAGAGGTCTCCAAAGGCGAAGTTGGCTGTTATTGAATACGCAATCAGCTCCTTTAACAAACATTCAATGAATCCTGAAGGCGCGGCTAATATTGGCATCCTGAAATTATGGCTTGCCAAGTTAGCACCATTGGCCCATGACAAAAATACAAAGCTCAAAGAAGCAGCAATTACATGCATTATATCAGTGTATTCTCACTTTGATTCTACTGCTGTCCTGAATTTCATCCTTAGTTTGTCAGTTGAAGAGCAAAATGTGTTGAGGCGAGCCCTTAAACAATATACTCCTCGCATTGAAGTAGATTTGATAAACTTTTTACAGAGCAAGAAAGATAGGCAGCGCTCTAAGTCTTCCTATGATCCATCTGATGTTGTTGGAACATCCTCAGAAGAGGGGTATGTTGGTGTTTCTCGGAAAGCTCATTACCTTGGAAGGTATTCTGCCGGTTCTGTTGATAGCGATAGTGGTAGGAAGTGGAGTTCCCAAGACTCTACCCTTGTTAAACCCAGCCTAGGCCAAGTAGCTTCTGGTGAAATTCAGGAATTCTTGCATCAGAATCATGAGGTTGATTTTAATCAGGGTAGTGTTGGTTCAAAAAGTAAGGATCTTGCATCCACAGTCAATCCAATAAGCCAAAATGTTGGCCCTCAAACTAATCAACTTGGGCATGTGGACAGTAGTATTAACTTTGAGGGTCTTTCAACTCCTCGTCTGGATGTAAATGGTCTGATGTCTGTAGAGTATTCAAATGTTACTGAAAGCTTTGGAGATGATAAAGAATATTCTTCTGAATTGGACCATGATCATCACTTAGCTGAAACTATGAACATTAACTCTTTGACTGACACAGGTCCCAGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCTCTGTTTCAAGCAAGAGGACTGCACTTCAACAGTTGGTTGAAGCTTCTAGAGCAAATGATCATTCTATTTGGACTAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTACTCTATCATTAATAGTTGAGATGCTCAAAAGCCAGAAAGATGCCATGGAAGATTCAGTCGAAATTGTAATTGAGAAGTTGCTTCATGTCAGTAAGGATATTGATCCCAAGGTCTCAAATACAGCGGATCACTGCCTGACCATTGTTTTATCTCAATACGATCCATTCAGATGTTTGAGTGTTATTGTCCCTTTACTGGTTTCTGAGGATGAGAAAACTCTTGTCACTTGCATAAACTGCTTGACAAAGCTTTTGGGCCGACTCTCTCAAGAGGAATTGATGGCTCAGTTACCCTCATTTCTGCCTGCACTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGTAAGACTGTGGTTTTCTGTTTGGTGGATATATATATCATTCTGGGGAAAGCATTCTTACCATACTTGCAAGGGCTTAACAGCACACAGTTGAAATTGGTCACCATTTATGCAAATCGAATTTCTCAAGCCAGGACAGGAGTAGCCATTGATGCCACCCAGGAGTAG 4335 0.4288 MEEALELARTKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDCCLDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRAILPPILQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELHRHNLPSSMVKDINARLEGIQPKIRSSDGIGSGFIAGEIKSSSVNPKKSSPKAKSSSRETSLFGGEGDLTERPIDPVKVYSEKELIREIEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAADYPSFRGLLKQLVGPLSVQLSDRRSSIVKQACHLLCFLSKDLLGDFEQCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIAECAKSDRNAVLRARCCEYALLILENWPDAPEILRLADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALLSLSNQASAPSSLPGYGTSAIVAMDRSSSISSGASVSSGITQAKSLGKGAERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSAFRSSSLDLGVDPPSSRDPPFPAAVPASNHLTNSATTESAASGVNKGSNRNGGLGLSDIITQIQASKDSGKLSCHGNATMDPASALTSYSSKRASERLQDRSSVDDINDIREARRFMNPHIDRQYMEATYKDGYFRDSQNSHVPNFQRPLLRKNVAGRMSVGRRRSFDDSQLSLGESSNYTDGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQLGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPACRKPFESYMERILPHVFSRLIDPKELVRQPSSMTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEYAISSFNKHSMNPEGAANIGILKLWLAKLAPLAHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNVLRRALKQYTPRIEVDLINFLQSKKDRQRSKSSYDPSDVVGTSSEEGYVGVSRKAHYLGRYSAGSVDSDSGRKWSSQDSTLVKPSLGQVASGEIQEFLHQNHEVDFNQGSVGSKSKDLASTVNPISQNVGPQTNQLGHVDSSINFEGLSTPRLDVNGLMSVEYSNVTESFGDDKEYSSELDHDHHLAETMNINSLTDTGPSIPQILHMICSGGDGSSVSSKRTALQQLVEASRANDHSIWTKYFNQILTVVLEVLDDSDSSIRELTLSLIVEMLKSQKDAMEDSVEIVIEKLLHVSKDIDPKVSNTADHCLTIVLSQYDPFRCLSVIVPLLVSEDEKTLVTCINCLTKLLGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIILGKAFLPYLQGLNSTQLKLVTIYANRISQARTGVAIDATQE 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1520 1444 Pfam CLASP N terminal 802 995 IPR024395 -
Mibi02g1520 1444 Pfam CLASP N terminal 284 500 IPR024395 -
Mibi02g1520 1444 Gene3D - 795 1019 IPR011989 -
Mibi02g1520 1444 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Mibi02g1520 1444 Gene3D - 268 506 IPR011989 -
Mibi02g1520 1444 MobiDBLite consensus disorder prediction 239 267 - -
Mibi02g1520 1444 MobiDBLite consensus disorder prediction 608 655 - -
Mibi02g1520 1444 PANTHER CLASP 32 1430 - -
Mibi02g1520 1444 SUPERFAMILY ARM repeat 289 1434 IPR016024 -
Mibi02g1520 1444 SMART TOG_3 270 514 IPR034085 -
Mibi02g1520 1444 SMART TOG_3 1200 1436 IPR034085 -
Mibi02g1520 1444 SMART TOG_3 3 224 IPR034085 -
Mibi02g1520 1444 SMART TOG_3 779 1028 IPR034085 -
Mibi02g1520 1444 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Mibi02g1520 1444 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Mibi02g1520 1444 SUPERFAMILY ARM repeat 2 402 IPR016024 -
Mibi02g1520 1444 FunFam Protein peg1 266 513 - -
Mibi02g1520 1444 Gene3D - 1 221 IPR011989 -
Mibi02g1520 1444 Gene3D - 1224 1434 IPR011989 -
Mibi02g1520 1444 MobiDBLite consensus disorder prediction 239 261 - -
Mibi02g1520 1444 MobiDBLite consensus disorder prediction 633 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1520 Mibi-ChrMibi02 15111132 15123489 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1520 02 15111132 15123489 Mibi06g2339 06 43625845 43637999 CCT
Mibi02g1520 02 15111132 15123489 Mibi02g1520 02 15111132 15123489 ECH