Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2329 ATGTCATCTTCTACAGTTTTTGTGAACATTACTCAGAAAGAAAGGCTTTGGGAAGATTGTTTGTGTAAGAAGACAATGGTGGGTATTTTGTCATTGATAACAGGGAGGGCAGGCCCGAGTGGATTTGGTTCTGCTACAACTGCAGAGAAGGTCACGGAAGGAATTGATGCCTCCAATCTCACTGCCATTATCACAGGAGGAGCAAGTGGAATTGGTTTAGAGACAGCAAGAGTTTTAGCTCTTAGAAAGGTCCATGTGATAATTGCTGCGAGGAACATGGAAGCTTGCAAGAAAGCAAAGAAGCTTATTCTTGACCAAAACCAGTCTGCTCGTATTGATATACTGAAGCTTGACCTTTCCTCTGTCAACTCTATCAGAGCATTTGTTGACAACTTCATCGCTCTTGATCTTCCTCTCAACATCTTAATAAACAATGCTGGAGTTATGTTCTGCCCTTTCCAACTCTCACAGGATGGGATTGAGATGCAGTTCGCAACAAATCATATCGGTCATTTCCTCTTGACCAATCTTCTTCTTGACAAGATGAAACAAACTGCAAAAGCCAGTGGGATTGAGGGAAGGATCGTGAATCTGTCATCAGTTGCCCACAATTATCCTTACTCAAAGGGGATTCGATTCGAGAAGATCAACAATCAAAATGGTTACTGTGACAAGAAGGCTTATGGGCAGTCCAAGTTGGCTAACATTCTTCACTCAAATGAGCTAGCTCGCCGCCTGCAGGAAGAAGGTGTGAACATTACAGCCAACTCAGTCCACCCAGGAGTGATAATGACTCCTCTCATGAGACATTCTTCATTCCTCATGCATCTTTTGAAAGTGTTCACCTTTTACATATGGAAGAATGTTCCACAGGGGGCAGCCACAACATGTTATGTTGCTCTGCATCCGAAAGTGAAAGGAGTGAATGGGAAATACTTTCAGGATTGCAACGAGCATAAGCCAAGTTCATATGCCAGAAACCAAGCGCTGGCTAGGAAACTCTGGGATTTCAGCAACACAGTCATCAGTTCACTTTCCAAGGCTTAG 1047 0.4336 MSSSTVFVNITQKERLWEDCLCKKTMVGILSLITGRAGPSGFGSATTAEKVTEGIDASNLTAIITGGASGIGLETARVLALRKVHVIIAARNMEACKKAKKLILDQNQSARIDILKLDLSSVNSIRAFVDNFIALDLPLNILINNAGVMFCPFQLSQDGIEMQFATNHIGHFLLTNLLLDKMKQTAKASGIEGRIVNLSSVAHNYPYSKGIRFEKINNQNGYCDKKAYGQSKLANILHSNELARRLQEEGVNITANSVHPGVIMTPLMRHSSFLMHLLKVFTFYIWKNVPQGAATTCYVALHPKVKGVNGKYFQDCNEHKPSSYARNQALARKLWDFSNTVISSLSKA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2329 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 60 321 IPR036291 -
Mibi06g2329 348 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 148 IPR002347 -
Mibi06g2329 348 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 228 247 IPR002347 -
Mibi06g2329 348 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 193 201 IPR002347 -
Mibi06g2329 348 Gene3D - 33 344 - -
Mibi06g2329 348 PANTHER RETINOL DEHYDROGENASE 39 341 - -
Mibi06g2329 348 CDD retinol-DH_like_SDR_c_like 61 335 - -
Mibi06g2329 348 PRINTS Glucose/ribitol dehydrogenase family signature 61 78 IPR002347 -
Mibi06g2329 348 PRINTS Glucose/ribitol dehydrogenase family signature 187 203 IPR002347 -
Mibi06g2329 348 PRINTS Glucose/ribitol dehydrogenase family signature 228 247 IPR002347 -
Mibi06g2329 348 PRINTS Glucose/ribitol dehydrogenase family signature 251 268 IPR002347 -
Mibi06g2329 348 PRINTS Glucose/ribitol dehydrogenase family signature 137 148 IPR002347 -
Mibi06g2329 348 Pfam short chain dehydrogenase 61 209 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2329 Mibi-ChrMibi06 43548670 43550513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2329 42 321 Acyl Lipid Metabolism Gene Families AT3G46170 24.150 1.59e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1506 02 14998443 15002920 Mibi06g2329 06 43548670 43550513 CCT
Mibi06g2329 06 43548670 43550513 Mibi06g2329 06 43548670 43550513 ECH