Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2166 ATGCGGTGTTGTTTTCTTCCATTGTTGTTGGCTTTAACCTCTTTACTGTTGCCGGTATCGCTAGTATACAGCGGATTACCGAGGAGTTTTCTGCCTCTTGAACGGGCTATTCCTCTGGGCCATCGAGTGGAGCTGCAAGTACTCACAGCACATGACAGAGCCAGACATGCTCGAATCTTGAAAGGTGTGGTAGGCGGTGTTGTCGACTTCTCAGTCGAAGGGACCTCCGATCCTTACGCCATTGGGCTGTACTTTACGAGAGTGAAGCTTGGCTCTCCTCCCAGAGAATTTAGAGTCCAGATTGATACTGGAAGTGACATATTGTGGGTTGCTTGCAATGCTTGCAGTGATTGCCCTCGATCTAGTGACCTTGGGATTGAGCTCAATTTCTTTGATACAGTCAGCTCATCCACGGCCACGCAAGTCTCCTGCTCAGACCAAATATGTTCTTCTGCGTTACAAAGTACTGGAACTGAATGCTCCCCTCAGATTAATCAGTGCAGCTACACTTTCCAGTATGGAGATGGAAGTGGGACATCAGGTTATTATGTATCTGATCTGATGCATTTTGACATGATGCTTGGACAATCTATGATTGTCAACTCTTCAGCTAATGTTGTTTTCGGGTGTAGCACCTATCAATCAGGAGAATTGACAAAGACGGATAAAGCAGTTGATGGAATATTTGGGTTTGGCCCTGGTGATTTATCTGTCATCTCACAATTGTCATCACGAGGTGTAACACCTGGGGTCTTCTCTCATTGTCTAAAAGGAGAAGGCAATGGAGGGGGCATATTAGTTCTTGGTGAGATTTTGGAGCCAAGTATTGTTTATAGCCCTCTAGTACCATCACAGCCCCATTACAACTTAAATCTTCAGAGCATTGATGTCAATGGACAACCTCTCCCAATTGATTCAGCTGCGTTTGCAACAGTTAACAACCAAGGAACTATCATTGACTCTGGTACAACGTTGGCATACTTTGTTCAAGAAGCATATGATCCTATTATTAATGCTATCAATACTGCTGCGTCCCAATTAGCGAATCCCATTATTTCAAAAGGATACCAATGTTATCTGGTCCAAAGCAGCATAGGTGATATATTTCCTCCAGTCAGTTTAAATTTTGCAGGCGGGGCATCCATGGTTTTGAAACCTGAACAGTACCTTATGCGTTATGGTTTCCTTGATGGTTCTGCGATGTGGTGTATTGGTTTCCAGAAGGCGCAGGAAGGGATTACGATTTTAGGAGATATTGTCCTAAAAGATAAAATTTTTGTGTACGACTTGGCTCATCAACGAATTGGGTGGACTAACTATGATTGTTCCTCGTCTGTAAATGTCTCCCTGACCACGAGCAAGGATGAGTACATCAATGCAAGAAAGCGGAGTGCAAGTAGCTCACAGATGGGCACTCTCACCAATTTGCTACCAGTTAGCATCGGCATTCTCATAATGTACATATTAGTTTTCAAGGAGTCCTTGTAG 1488 0.4388 MRCCFLPLLLALTSLLLPVSLVYSGLPRSFLPLERAIPLGHRVELQVLTAHDRARHARILKGVVGGVVDFSVEGTSDPYAIGLYFTRVKLGSPPREFRVQIDTGSDILWVACNACSDCPRSSDLGIELNFFDTVSSSTATQVSCSDQICSSALQSTGTECSPQINQCSYTFQYGDGSGTSGYYVSDLMHFDMMLGQSMIVNSSANVVFGCSTYQSGELTKTDKAVDGIFGFGPGDLSVISQLSSRGVTPGVFSHCLKGEGNGGGILVLGEILEPSIVYSPLVPSQPHYNLNLQSIDVNGQPLPIDSAAFATVNNQGTIIDSGTTLAYFVQEAYDPIINAINTAASQLANPIISKGYQCYLVQSSIGDIFPPVSLNFAGGASMVLKPEQYLMRYGFLDGSAMWCIGFQKAQEGITILGDIVLKDKIFVYDLAHQRIGWTNYDCSSSVNVSLTTSKDEYINARKRSASSSQMGTLTNLLPVSIGILIMYILVFKESL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2166 495 PRINTS Pepsin (A1) aspartic protease family signature 317 328 IPR001461 GO:0004190|GO:0006508
Mibi06g2166 495 PRINTS Pepsin (A1) aspartic protease family signature 414 429 IPR001461 GO:0004190|GO:0006508
Mibi06g2166 495 PRINTS Pepsin (A1) aspartic protease family signature 90 110 IPR001461 GO:0004190|GO:0006508
Mibi06g2166 495 ProSiteProfiles Peptidase family A1 domain profile. 84 438 IPR033121 -
Mibi06g2166 495 FunFam Aspartic proteinase-like protein 2 271 449 - -
Mibi06g2166 495 Gene3D Acid Proteases 271 449 IPR021109 -
Mibi06g2166 495 Pfam Xylanase inhibitor C-terminal 287 438 IPR032799 -
Mibi06g2166 495 SUPERFAMILY Acid proteases 79 446 IPR021109 -
Mibi06g2166 495 FunFam Aspartic proteinase-like protein 2 67 270 - -
Mibi06g2166 495 Pfam Xylanase inhibitor N-terminal 84 269 IPR032861 -
Mibi06g2166 495 Gene3D Acid Proteases 69 270 IPR021109 -
Mibi06g2166 495 PANTHER ASPARTYL PROTEASES 24 436 IPR001461 GO:0004190|GO:0006508
Mibi06g2166 495 CDD pepsin_A_like_plant 84 442 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2166 Mibi-ChrMibi06 42134168 42138313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2166 79 444 Miscellaneous Gene Families AT1G44130 29.124 3.35e-45 161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1320 02 13041671 13045577 Mibi06g2166 06 42134168 42138313 CCT
Mibi06g2166 06 42134168 42138313 Mibi06g2166 06 42134168 42138313 ECH