Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1320 ATGCGGGGTTTTCTTCCGATGTTATTGGCCTTAGCCGTCATTTTGGTGCCGTTACCAGTAGTTCACGGCGGGTTTTCCGGTGGTTTCCTCCCTCTGGAAAGAGCAATTCCTCTTAGCCGGAGAGTGGAGATGGAAGCACTCAGAGCTCGCGACCGAGCTCGGCATGCTCGAATGTTGCAAGATGTATCAGGTGGTGGTGTGGTCGATTTCTCAGTCAAAGGGATCTCTGATCCTTCCTCTATTGGGCTGTATTATACAAAAGTGAAGCTGGGCTCACCTCCAAGAGAATTCAACGTCCAGATTGATACTGGAAGTGACATATTGTGGGTTAACTGCAATACTTGCGGTAATTGCCCTCAATCTAGTGAATTGGAGATTCAGCTAAACTTCTTTGATACAGCCAGCTCATCCACTTCAACGCTGATTTCCTGCTCAGACCCAGTATGCACTTCCTCAACTCAAAGTGCCGCAACTGAATGCACCCCTCAGATTAACCAGTGCAGCTACACCTTTCAGTATGGAGATGGAAGTGGAACATCGGGGTTTTATGTTTCTGATGCGATGTATTTTGACATGATCCTTGGGCAGTCTATGCTGTCTAATTCTTCAGCTAGAGTTGTTTTCGGGTGTAGTACCTATCAGTCTGGAGATTTGACGAAGCCAGATAAAGCAGTGGATGGAATTTTTGGGTTTGGCCCTGGTGCTCTATCCGTTATATCACAAATATCCTCACGAGGCATGACCCCCAAAGTATTTTCTCATTGTTTAAAAGGAGAGGGTAATGGAGGAGGCATACTAGTTCTTGGTGAGATTTTGGAGCCAAGTCTTGTTTATACTCCTCTTGTACCGTCACAGCCTCATTACAACTTAAATCTTCAGAGCATTGGTGTTAACGGACGAATTATCCCCATTAATCCAGCAGTTTTTGCAACATCTAACAACCGAGGAACTATAGTTGATACTGGTACAACCATGGCATACCTTGTTCAAGAAGCATATGATCCTTTGGTCAATGCTATAACCACCATTGTTTCACAGTCAGCCACTCCCATCATTTCAAAAGGAAGCCAGTGTTATTTGGCCTCAACCAGTGTAGGTAATATATTTCCTTCAGTCAGTTTGATCTTTGCTGGTGGAGCATCCATGGTTTTAGAACCAGAACAGTATCTTATACGTACTGATTTCATTGATGGTGTTCCAGAGTGGTGTATTGGTTTCCAGAAAGTGCAGGAGGGAGTTTCAATTTTAGGAGATCTTGTCCTTAAAGATAAGATATTTGTCTACGACTTAGCTCATCAACGAATTGGATGGGCTAACTATGATTGTTCTCTGTCTGTGAATGTCTCTGTGACCACAACCAAGGATGAGTACATTAGTGCAGGACAGGTGACTGTGAGCAGTTCAGAGTCAGACAGTCTCACCAAGTTACTACCTTTAAGCATTGCAGCTTTCTTTATGCACATAGCAGTTTTCTGGGAGTTCCAATTTTTGTGA 1494 0.4391 MRGFLPMLLALAVILVPLPVVHGGFSGGFLPLERAIPLSRRVEMEALRARDRARHARMLQDVSGGGVVDFSVKGISDPSSIGLYYTKVKLGSPPREFNVQIDTGSDILWVNCNTCGNCPQSSELEIQLNFFDTASSSTSTLISCSDPVCTSSTQSAATECTPQINQCSYTFQYGDGSGTSGFYVSDAMYFDMILGQSMLSNSSARVVFGCSTYQSGDLTKPDKAVDGIFGFGPGALSVISQISSRGMTPKVFSHCLKGEGNGGGILVLGEILEPSLVYTPLVPSQPHYNLNLQSIGVNGRIIPINPAVFATSNNRGTIVDTGTTMAYLVQEAYDPLVNAITTIVSQSATPIISKGSQCYLASTSVGNIFPSVSLIFAGGASMVLEPEQYLIRTDFIDGVPEWCIGFQKVQEGVSILGDLVLKDKIFVYDLAHQRIGWANYDCSLSVNVSVTTTKDEYISAGQVTVSSSESDSLTKLLPLSIAAFFMHIAVFWEFQFL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1320 497 FunFam Aspartic proteinase-like protein 2 271 449 - -
Mibi02g1320 497 Gene3D Acid Proteases 271 449 IPR021109 -
Mibi02g1320 497 FunFam Aspartic proteinase-like protein 2 67 270 - -
Mibi02g1320 497 Pfam Xylanase inhibitor N-terminal 84 269 IPR032861 -
Mibi02g1320 497 Gene3D Acid Proteases 69 270 IPR021109 -
Mibi02g1320 497 PANTHER ASPARTYL PROTEASES 20 436 IPR001461 GO:0004190|GO:0006508
Mibi02g1320 497 SUPERFAMILY Acid proteases 81 445 IPR021109 -
Mibi02g1320 497 PRINTS Pepsin (A1) aspartic protease family signature 90 110 IPR001461 GO:0004190|GO:0006508
Mibi02g1320 497 PRINTS Pepsin (A1) aspartic protease family signature 414 429 IPR001461 GO:0004190|GO:0006508
Mibi02g1320 497 PRINTS Pepsin (A1) aspartic protease family signature 317 328 IPR001461 GO:0004190|GO:0006508
Mibi02g1320 497 CDD pepsin_A_like_plant 84 442 IPR034161 -
Mibi02g1320 497 Pfam Xylanase inhibitor C-terminal 287 438 IPR032799 -
Mibi02g1320 497 ProSiteProfiles Peptidase family A1 domain profile. 84 438 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1320 Mibi-ChrMibi02 13041671 13045577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1320 81 443 Miscellaneous Gene Families AT1G44130 28.272 1.04e-44 160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1320 02 13041671 13045577 Mibi06g2166 06 42134168 42138313 CCT
Mibi02g1320 02 13041671 13045577 Mibi02g1320 02 13041671 13045577 ECH