Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0292 ATGTGCCCCCTCACAGCCAGTGACCTGAAGCGAATATTTGAGAAGCTAGACATGAACGAGGATGGGCTGGTGAGTCTTGAAGAGCTAAAATGGCTGCTTGACAACATAGGCTACGAGTTTAGCCTCCATGAGCTTGAATCTTTCCTCGGAAAACAGAAGCTGGACTTTAATGAATTCATGCTCTTCTGGGAATCCATATCGGAACAGAGCAGTAATAACAGGGGAGATGATGACGTGGACGGTGACCTGGCCAAGGCGTTTAAGGTGTTTGACTTGGATGGAGATGGATTCATCAGCAGCCCAGAATTGGAGTGCGTGTTGAAGAGGCTTCACTTATGGGATGAACACAATGGCAAAGATTGTTCCACCATGATTTGTGCCTTTGACACCAACTCTGATGGTCGCCTTGATTTCCAAGAGTTCAAGAACATGATGCTCCTTACCTCTTCTTCTTCTTGA 459 0.4641 MCPLTASDLKRIFEKLDMNEDGLVSLEELKWLLDNIGYEFSLHELESFLGKQKLDFNEFMLFWESISEQSSNNRGDDDVDGDLAKAFKVFDLDGDGFISSPELECVLKRLHLWDEHNGKDCSTMICAFDTNSDGRLDFQEFKNMMLLTSSSS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0292 152 ProSitePatterns EF-hand calcium-binding domain. 17 29 IPR018247 -
Mibi05g0292 152 ProSitePatterns EF-hand calcium-binding domain. 129 141 IPR018247 -
Mibi05g0292 152 ProSiteProfiles EF-hand calcium-binding domain profile. 116 151 IPR002048 GO:0005509
Mibi05g0292 152 SUPERFAMILY EF-hand 8 149 IPR011992 -
Mibi05g0292 152 Pfam EF-hand domain pair 83 145 IPR002048 GO:0005509
Mibi05g0292 152 Gene3D - 3 147 - -
Mibi05g0292 152 SMART efh_1 120 148 IPR002048 GO:0005509
Mibi05g0292 152 SMART efh_1 82 110 IPR002048 GO:0005509
Mibi05g0292 152 SMART efh_1 8 36 IPR002048 GO:0005509
Mibi05g0292 152 ProSitePatterns EF-hand calcium-binding domain. 91 103 IPR018247 -
Mibi05g0292 152 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 53 145 - -
Mibi05g0292 152 Pfam EF hand 9 30 IPR002048 GO:0005509
Mibi05g0292 152 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Mibi05g0292 152 CDD EFh 82 145 IPR002048 GO:0005509
Mibi05g0292 152 ProSiteProfiles EF-hand calcium-binding domain profile. 78 113 IPR002048 GO:0005509
Mibi05g0292 152 FunFam Calmodulin 1 4 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0292 Mibi-ChrMibi05 2895736 2896194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0292 4 146 EF-hand Containing Proteins AT1G21550 46.622 8.21e-38 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2421 08 41972564 41973022 Mibi05g0292 05 2895736 2896194 CCT
Mibi05g0292 05 2895736 2896194 Mibi05g0292 05 2895736 2896194 ECH