Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02883 ATGGATATATCAGAGTACACAAGAATTGTATTTGATAAAATTCAGAAATTTGAGCCAGAAAATGCTAGAAAGATAATTGGCTATCTTCTTTTACAAGACAATGGCGAACAAGAAATGGCTAGGTTGGCTTCTTGTCCTGACCACATCATCGGTGAAGTCGTCTTTAAGGCCAAAACTGATCTTCAAATGTTGGCTGTTAATTCAACCATGATGCCAATTCCGCCACCTAATGTCAACCCTCAACAAGGTTTAAGCCATTTTCCGGCATTATCTCCGTCTTCACCGCTGAACTTTCAAGTTCCATCTTCCTATTGGGATTCACAATCTACCAGCAATGCAAATCCTGAATTTACGGGAATGAGTTACATGGATTCTATTGTAGAACTTCAAAAACAAACACAATTGCTGAGTTTGGAGAATCATTTGGATCATGTGAATACCGGAACTCGAGGTCTTGTTGTTAATGATTACAACAATGGCTTAGATTCTTCTGCTGTCAATTTTGGTGGAAAAGCTACTAAAAGGTTTTCAAATTCAAACATGTCTGAATTTCCACCCAAGATCTGTCACTATTTCAGTAAAGGTTACTGTAGGCATGGAGGTAACTGTAGATATTTTCATGGTCAAGTTCTTCATGAGAGTTTCTCTCATATGCATGGAAATAATGATAATACTAGTAATGAGGATCCGGTGATTTCACCAGGGTCACTAGCTCAGATAGAGTCTGAAATTATTGAGCTTTTAAAGCAGAGAAGAGGGAATCCAATGTCAATTGCTTCGCTGCCGATGGCATACTATGATAAATATAAGAAGGTACTGCAAGCACATGGTTATTTAACTGAGAGCCAGCGACATGGTAAGTCTGGCTATAGTTTGACAAAGCTTCTCGCACGACTCAATAGTATTCGGCTAATTGACAGGCCTCACGGACAACATGCAGTGGTTCTGGCTGAAGATGCTCCAAAATACATTCAAAAGGGTGATTCTGTTCAAAATATCAGTGCATCGCGACAAATATATTTGACTTTTCCAGCTGACAGCACTTTCACTGAAGAGGATGTTGCGGAATACTTCAACGCATTTGGGTATGTTGAAGATGTTAGGATTCCATGCCAGCAGAAAAGAATGTTTGGATTTGTAACGTTTGCTGATCCTGAAACTGTGAGAATGATTTTGGATAAGGGAAATCCTCATCATGTTCGTGGCTCTCGTGTGCTTGTGAAACCTTACAGGGAGAAGACAAAGGTTGTTGAAAGGAGGTACCATGATAGAATGGAGCACTCTGTTTGTTGTCCACATCACTTTGCAAATATCGACTCCGAACTTGACTCAATTCCAAGAAGTTATGGGAACCATAGATCTCTAAGTAGACAGTTGATGGAAGAGCATGAACAAGCTTTTGAATTGCAAAGGAGACGTCTTGCGCAGCTGCAATTTACCCGACGACCTTTTCCCATTTCACCTCATTTTGGGTTTCCCATGGACACGTTAAGAGTTCCAGATGATCATTTCAATTTCCAGGCTGCAGAACCTCTAAACCATGTGTTGAATAACCACACCAAGAATACAGACACTGATTCCTCTGGAGGGAATAGCAACGAAGGACTCAATCTCCCCGACAGTCCATTTGCATTTCCAATGGAAAATGATAAATAG 1656 0.4034 MDISEYTRIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKAKTDLQMLAVNSTMMPIPPPNVNPQQGLSHFPALSPSSPLNFQVPSSYWDSQSTSNANPEFTGMSYMDSIVELQKQTQLLSLENHLDHVNTGTRGLVVNDYNNGLDSSAVNFGGKATKRFSNSNMSEFPPKICHYFSKGYCRHGGNCRYFHGQVLHESFSHMHGNNDNTSNEDPVISPGSLAQIESEIIELLKQRRGNPMSIASLPMAYYDKYKKVLQAHGYLTESQRHGKSGYSLTKLLARLNSIRLIDRPHGQHAVVLAEDAPKYIQKGDSVQNISASRQIYLTFPADSTFTEEDVAEYFNAFGYVEDVRIPCQQKRMFGFVTFADPETVRMILDKGNPHHVRGSRVLVKPYREKTKVVERRYHDRMEHSVCCPHHFANIDSELDSIPRSYGNHRSLSRQLMEEHEQAFELQRRRLAQLQFTRRPFPISPHFGFPMDTLRVPDDHFNFQAAEPLNHVLNNHTKNTDTDSSGGNSNEGLNLPDSPFAFPMENDK 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02883 551 ProSiteProfiles Zinc finger C3H1-type profile. 183 210 IPR000571 GO:0046872
Mepo7g02883 551 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 348 403 IPR000504 GO:0003723
Mepo7g02883 551 MobiDBLite consensus disorder prediction 517 551 - -
Mepo7g02883 551 CDD RRM_AtC3H46_like 339 408 IPR034365 -
Mepo7g02883 551 ProSiteProfiles OST-type HTH domain profile. 236 319 IPR025605 -
Mepo7g02883 551 SMART rrm1_1 338 408 IPR000504 GO:0003723
Mepo7g02883 551 Gene3D - 337 416 IPR012677 -
Mepo7g02883 551 SUPERFAMILY RNA-binding domain, RBD 347 420 IPR035979 GO:0003676
Mepo7g02883 551 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) 1 547 - -
Mepo7g02883 551 FunFam zinc finger CCCH domain-containing protein 53-like isoform X2 344 415 - -
Mepo7g02883 551 Coils Coil 460 480 - -
Mepo7g02883 551 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 337 412 IPR000504 GO:0003723
Mepo7g02883 551 Pfam OST-HTH/LOTUS domain 236 313 IPR025605 -
Mepo7g02883 551 SUPERFAMILY CCCH zinc finger 186 208 IPR036855 GO:0046872
Mepo7g02883 551 MobiDBLite consensus disorder prediction 517 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02883 Mepo-Chr7 39817773 39822708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02883 - - gmx:100818984 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02883 7 39817773 39822708 Mepo7g02883 7 39817773 39822708 ECH
Mepo3g04726 3 58835267 58838489 Mepo7g02883 7 39817773 39822708 PCT