Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01539 ATGAGTCTTGAGAGTCCTGTGAAGGCTGAAGGAGGAGAAGCTTATGAAGGTGGAGATGAGAATGAGAATGAAAATGAAAATGAAAATGAAAATTCTCCCTCAATTAAGAAGGAACTCTCAAACATATATACTCAACTTGATGTACCTGTTGCAAGCAAAGAAAGTTATGATCCAACAGATAACGACCAAGCCACCAATGAGTTTGAAGATCAAAGTGATAGGTACAGCCGAAAGAGCGCTGATACAAACAATAGTGGACATGTGAGTGATCCTGGTATTGGGAAGACTGATTTCTTGGCTTCACCAAAGCTCAAGAGATCGTGCTCTAACCTTGAAAGCAGGGATGTTCGTATGCAGATAAATGAATACTTATCTCCTTTGCAGGCACAGTCTTTTGAAGACTTTCGAGATTTATCAATAAACCCAATGATTAATCTTAAGAGGTCTAGGTCTATGACAAGTCACTGCAGTGCTGATCGAGTAATGTTGAAACGGCATTCTTCAAGTCGAGTACTCCCGTCTGGAAGTAAAAAATTGTGGTGGAAGTTGTTCTTGTGGAGCCATAGGAACATACATAGAACATTCTCTAGAAAATCAAAATTTGTTCCTGCTATTAGTTCCTTAAGCAATCAATTAGGGTATTATTCTTCAGACACCCTCGAACCAAAACAAATCAAGGCACTGAGACACGTGCAATCGTCTGTATCAAATACTACGCACTCCCCTAATAAAAGCATCAATGATGATGATCAAAGGAGGAGCAGATTTCAAAACCAATGGTTTGCTTTTTCGACAGAGACATCTTCTTATGCAAGGGTGGATGCATGGGTCAAAGATCTTGAAATTCAGGAACCAGCACCGGAGGATGATCCTCTTGATGAAATTGCCGGAAGCATTTCCTTCCCACCTTCTCCTGATGCCGGTAGATCAAAGATAATAAGCACTTCTCAATTGACTCATTCAAATTCCAATCTTCCGAAGGATATTTTGTTAGCCAATAGTATGGTCCAGTCTCTAAATCCAGCTTCATCGGTTGCTCACATATCCGGTGTTGGTATAAAAGCCATCCCTGTGATTTCACACTTTTCCAATCTCCGCTCAGTCAATCTGTCCAACAATTTCATAGTTACAATCTCACCAGGATGTCTACCAAAGAGTGTTCAAACACTTAATTTGTCAAGAAACAAGATTAGCACCATTGAGGGCCTCAAAGAATTGACTCGGCTGAGAGTACTTGACCTAAGTTACAACTGCATCTCAAGAGTTGGACAAGGTTTGTCAAGTTGTACAATTGTCAAAGAGCTATATCTTGCTGAGAACAAGATAAGTGATGTTGAGGGGCTTCATAGGTTGTTTAAGCTAACAGTTCTGGACTTGAGCTTCAACAAAATCACGACAACAAAAGCATTAGGCCAGCTAGTGGCTAACTACAACTCACTCCAGGCACTTAATCTACTTGGAAATGCTATTCAGAGAAACATCGGTGATGAACAACTAAACAAAGCAGTAACCGGTCTCCTTCCAAAGCTGGTGTACCTGAATAAACAACCCATCAAGGCTAAAAGGGCGATGCGGGAAATATTGACTGATAGTGTTGCAAAAGCTGCACTTGGGAACAGCAAGAAGCGGAGCTATGTAAAAAGATCAGTAAGCCAAGGAGGTTCAAGTTCCAGCAGAGGTCATAGAAGCAGTGCAAGTGTTGCACCGAATAGCAGGATCCGGAGAAGGAGGTGA 1734 0.4129 MSLESPVKAEGGEAYEGGDENENENENENENSPSIKKELSNIYTQLDVPVASKESYDPTDNDQATNEFEDQSDRYSRKSADTNNSGHVSDPGIGKTDFLASPKLKRSCSNLESRDVRMQINEYLSPLQAQSFEDFRDLSINPMINLKRSRSMTSHCSADRVMLKRHSSSRVLPSGSKKLWWKLFLWSHRNIHRTFSRKSKFVPAISSLSNQLGYYSSDTLEPKQIKALRHVQSSVSNTTHSPNKSINDDDQRRSRFQNQWFAFSTETSSYARVDAWVKDLEIQEPAPEDDPLDEIAGSISFPPSPDAGRSKIISTSQLTHSNSNLPKDILLANSMVQSLNPASSVAHISGVGIKAIPVISHFSNLRSVNLSNNFIVTISPGCLPKSVQTLNLSRNKISTIEGLKELTRLRVLDLSYNCISRVGQGLSSCTIVKELYLAENKISDVEGLHRLFKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNAIQRNIGDEQLNKAVTGLLPKLVYLNKQPIKAKRAMREILTDSVAKAALGNSKKRSYVKRSVSQGGSSSSRGHRSSASVAPNSRIRRRR 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01539 577 PANTHER NISCHARIN RELATED 146 567 - -
Mepo7g01539 577 SMART LRR_typ_2 451 473 IPR003591 -
Mepo7g01539 577 SMART LRR_typ_2 362 385 IPR003591 -
Mepo7g01539 577 SMART LRR_typ_2 406 429 IPR003591 -
Mepo7g01539 577 MobiDBLite consensus disorder prediction 230 251 - -
Mepo7g01539 577 MobiDBLite consensus disorder prediction 230 244 - -
Mepo7g01539 577 MobiDBLite consensus disorder prediction 544 570 - -
Mepo7g01539 577 ProSiteProfiles Leucine-rich repeat profile. 386 407 IPR001611 GO:0005515
Mepo7g01539 577 SMART LRR_sd22_2 384 405 - -
Mepo7g01539 577 SMART LRR_sd22_2 406 428 - -
Mepo7g01539 577 SMART LRR_sd22_2 451 472 - -
Mepo7g01539 577 SMART LRR_sd22_2 429 450 - -
Mepo7g01539 577 MobiDBLite consensus disorder prediction 34 48 - -
Mepo7g01539 577 SUPERFAMILY Outer arm dynein light chain 1 353 518 - -
Mepo7g01539 577 ProSiteProfiles Leucine-rich repeat profile. 408 430 IPR001611 GO:0005515
Mepo7g01539 577 FunFam Outer arm dynein light chain 1 protein 425 523 - -
Mepo7g01539 577 Gene3D Ribonuclease Inhibitor 308 428 IPR032675 -
Mepo7g01539 577 ProSiteProfiles Leucine-rich repeat profile. 453 474 IPR001611 GO:0005515
Mepo7g01539 577 MobiDBLite consensus disorder prediction 286 311 - -
Mepo7g01539 577 FunFam Outer arm dynein light chain 1 protein 311 424 - -
Mepo7g01539 577 Pfam Leucine Rich repeat 453 465 IPR001611 GO:0005515
Mepo7g01539 577 Gene3D Ribonuclease Inhibitor 429 525 IPR032675 -
Mepo7g01539 577 MobiDBLite consensus disorder prediction 543 577 - -
Mepo7g01539 577 Pfam Leucine rich repeat 363 417 IPR001611 GO:0005515
Mepo7g01539 577 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01539 Mepo-Chr7 24395332 24399062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01539 357 551 Receptor kinase-like Gene Family AT5G56040 28.638 8.32e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01539 - - tpra:123920827 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01539 7 24395332 24399062 Mepo7g01539 7 24395332 24399062 ECH
Mepo7g01539 7 24395332 24399062 Mepo3g05725 3 71376851 71381110 PCT