Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05725 ATGGCTATGTGTAGATGTGTCTCTGTTTTGATTGGAAGGAAGGATAAAATCAAGGGCATTGAAGGATCTTCAAAAGGGGACCTCAAAAAGTTACATGCCAAAGTACAACACCCAACGATATCTTCCAAGAGTCGTGATATAAAGCCAGATGACACCCATGATGTTACAACCGGTGGTACCCAGATGAATTCAAGGTGCAATGTGAAAGTTCCGAGTCCCGAGAGCCCTATGAAGACTGAAGTAGAGGAAGCTTATGAAGGGGAAGATGAACATGAAGATTCACCATCTATCAAGAGAGAGCTCTCTGATTTTGATCTCCAAGTTCATGAAGCTGTTGCAAGCAAAGTAGGATATGACCCAACAGGTAAAGAGATCAACTCCCCCAGTTTATATAAACAACAAACCAACATTCAATTGGAAGACGAAGATGATAAATACGACAAAAACAGTGTTGATTTGATCCAAAGTGGGCATGTCAGTGATCCTGGTATGGGCAAGCCTGACTTCTGGGCTTCTCCAGAGCTCAAGCGATCTTGCTCTAACCTGGAAAGAAGGGATATATTTAGGAAAACAGCTCATCCCTTTGCATCTTCAAAGTCACATTCTTTTGAGGATTTGCAGGAATTATCAGCAAATCAGTTGGTTAATCTAGAGAGCCCCAGGTCTGTGATGACTCAGCGCAGTGCTGATAGAGTGATGTTGAAAAGGCGTTCGTCTAGTCAAGTTCTCCCTTCTGGAAGTAAAAGATTGTGGTGGAAGTTGTTCCTCTGGAGCCACAGGAATATTCATCAACCTTGGGTCAGCAAATCAACACAATTACACCCTGCAAGTGCTGTTTTTAATAGTCAATGCGGGTACTCTTCGGACATCATGGAACCAAAACAAGGTAAGACATTGAGACATGTGGGATCACCCTCTCATGCATCATCTTCGGGGGAGTACTTTAGCAAAAGCAGCAAGGATAAAAATATTGATAATCAAAAGTGGAGCAGATTTCACAAAGAAAATAACTTCGATTTTCGGACAGAAAATCAATGGGTAGCTTTCTCAACAGAATCGTCCTCCTTTAACAGAGTGGATGAGTGGGTGAAAGATCTTGAAAATCAGCAGCCACCTTCTGAGGATGATTTTGCTGATGACAATATTGGAACCACTGTCTTGCCACCTTCTCCGGATGCTGATAGATCAATGGCAAGAATCACAACTCAGTTACCTCGAAATCAAGATGCCGATCTTTCAAAGGATATTTTGTATGCCAATAGCGTGGTGCAATCTCTGAATCCAGCCTCAACTGCAGCTCATATATCCGGTATTGGTATGAAAGCCATCCCTGCAATTACACACTTCTCCAGTCTTCGCTCGGTGAATCTGTCAAACAATTTCATAGTTCATATCACACCTGGATTTCTCCCAAAGGGTCTTCATACACTTAATTTGTCAAGAAACAAGATCAGCACCATTGAGGGCCTCCGGGAATTAACCCGACTGCGGGTACTTGACCTAAGTTATAATCGCATTTCAAGAATTGGACAAGGGCTATCAAGTTGTACACTGGTCAAAGAGCTATATCTTGCGGGAAACAAGATAAGTGATGTTGAGGGCCTACACAGGTTATTCAAGCTAACAGTTCTGGACTTGAGCTTTAACAAGATCACGACAGCAAAAGCACTGCGCCAGCTTGTAGCTAACTACAACTCAGTTCAGGCCTTGAATCTGCTCGGAAATCCAATTCAAAGCAACATCAGCGACGAGCAGTTGCGCAAAGCAGTTTGTGATCTTCTTCCAAAGCTAGTGTACCTGAACAAGCAATCCATCAAGCCTCAAAGGGCACGAGAGATGCTCACTGATAGTGTTGCCAAAGCTGCACTTGGAAACAGCAGCCGGACCCCCAAAAGAAGAACACTGAAGAAAGGTGGCCAAGGAGGATCAAGTTCCTCCAGTGTGCATAGAAGTAGAAGCAGTGCTAGCTTAGCCCAGAATAGCAGGCAAAGGTCAAAGAGTCAAACTAAGCATCATTAG 2019 0.4344 MAMCRCVSVLIGRKDKIKGIEGSSKGDLKKLHAKVQHPTISSKSRDIKPDDTHDVTTGGTQMNSRCNVKVPSPESPMKTEVEEAYEGEDEHEDSPSIKRELSDFDLQVHEAVASKVGYDPTGKEINSPSLYKQQTNIQLEDEDDKYDKNSVDLIQSGHVSDPGMGKPDFWASPELKRSCSNLERRDIFRKTAHPFASSKSHSFEDLQELSANQLVNLESPRSVMTQRSADRVMLKRRSSSQVLPSGSKRLWWKLFLWSHRNIHQPWVSKSTQLHPASAVFNSQCGYSSDIMEPKQGKTLRHVGSPSHASSSGEYFSKSSKDKNIDNQKWSRFHKENNFDFRTENQWVAFSTESSSFNRVDEWVKDLENQQPPSEDDFADDNIGTTVLPPSPDADRSMARITTQLPRNQDADLSKDILYANSVVQSLNPASTAAHISGIGMKAIPAITHFSSLRSVNLSNNFIVHITPGFLPKGLHTLNLSRNKISTIEGLRELTRLRVLDLSYNRISRIGQGLSSCTLVKELYLAGNKISDVEGLHRLFKLTVLDLSFNKITTAKALRQLVANYNSVQALNLLGNPIQSNISDEQLRKAVCDLLPKLVYLNKQSIKPQRAREMLTDSVAKAALGNSSRTPKRRTLKKGGQGGSSSSSVHRSRSSASLAQNSRQRSKSQTKHH 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05725 672 Gene3D Ribonuclease Inhibitor 398 513 IPR032675 -
Mepo3g05725 672 ProSiteProfiles Leucine-rich repeat profile. 518 539 IPR001611 GO:0005515
Mepo3g05725 672 ProSiteProfiles Leucine-rich repeat profile. 473 494 IPR001611 GO:0005515
Mepo3g05725 672 MobiDBLite consensus disorder prediction 368 395 - -
Mepo3g05725 672 FunFam Outer arm dynein light chain 1 protein 398 511 - -
Mepo3g05725 672 Gene3D Ribonuclease Inhibitor 514 611 IPR032675 -
Mepo3g05725 672 SMART LRR_sd22_2 516 537 - -
Mepo3g05725 672 SMART LRR_sd22_2 471 492 - -
Mepo3g05725 672 SMART LRR_sd22_2 538 559 - -
Mepo3g05725 672 SMART LRR_sd22_2 493 515 - -
Mepo3g05725 672 MobiDBLite consensus disorder prediction 54 70 - -
Mepo3g05725 672 MobiDBLite consensus disorder prediction 622 672 - -
Mepo3g05725 672 MobiDBLite consensus disorder prediction 302 317 - -
Mepo3g05725 672 MobiDBLite consensus disorder prediction 19 53 - -
Mepo3g05725 672 SUPERFAMILY Outer arm dynein light chain 1 444 607 - -
Mepo3g05725 672 SMART LRR_typ_2 493 516 IPR003591 -
Mepo3g05725 672 SMART LRR_typ_2 449 471 IPR003591 -
Mepo3g05725 672 SMART LRR_typ_2 538 559 IPR003591 -
Mepo3g05725 672 MobiDBLite consensus disorder prediction 638 664 - -
Mepo3g05725 672 FunFam Outer arm dynein light chain 1 protein 512 610 - -
Mepo3g05725 672 PANTHER NISCHARIN RELATED 211 666 - -
Mepo3g05725 672 ProSiteProfiles Leucine-rich repeat profile. 495 517 IPR001611 GO:0005515
Mepo3g05725 672 ProSiteProfiles Leucine-rich repeat profile. 540 561 IPR001611 GO:0005515
Mepo3g05725 672 Pfam Leucine Rich repeat 540 552 IPR001611 GO:0005515
Mepo3g05725 672 MobiDBLite consensus disorder prediction 297 320 - -
Mepo3g05725 672 MobiDBLite consensus disorder prediction 19 96 - -
Mepo3g05725 672 Pfam Leucine rich repeat 451 506 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05725 Mepo-Chr3 71376851 71381110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05725 473 582 Receptor kinase-like Gene Family AT4G39400 34.188 9.53e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05725 - - cam:101493323 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05725 3 71376851 71381110 Mepo3g05725 3 71376851 71381110 ECH
Mepo7g01539 7 24395332 24399062 Mepo3g05725 3 71376851 71381110 PCT