Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01225 ATGGGAAATTCTTTTGGTTGTTCAGCTTCTGGTGAGAGGTTGGTATCTGCAGCAAGAGATGGTGATTTGGTTGAAGCAAAGATGCTTTTGGAATTCAATCCTTGTCTTGCAAAATACTCAACTTTTGGTGGTCTTAATTCACCTCTTCATTTTGCAGCTTCTAAGGGTCATAATGAGATTGTGGCATTGTTGCTTGAGAAAGGAGCTGATGTGAATTCAAGGAACTATTGTGGGCAGACGGCTTTGATGCAAGCTTGTAGACATGGTCATTGGGAAGTTGTACAGACCCTTATGCTCTACAGATGTAATGTTATGAAAGCAGATTATCTCAGTGGGAGGACAGCTCTTCACTTTGCAGCTGTCAGTGGGCATGTAAGATGCATTAGACTTGTGGTGGCTGACTTGGTCCCAAGTGCTCCTTATGAAACTCTACATGCTCGTGTGGATGCTGATGTTGGTGATGGATCAAATACAAAAAGAAAAAACGAACAAAGTGAGTTGTCCAAGTTCGTAAACAAGACAGCAGATGCAGGTATTACTGCACTTCATATGGCTGCGTTGAACGGGTATTTCGATTGTGTACAACTGCTACTTGATCTTAATGCAAATGCATCGGCTGCAACATATCATTATGGAACATCGATGGATTTAATAGGGGCTGGAAGCACTCCATTGCATTATGCTGCTTGTGGCGGAAATTTAAAATGTTGTCAGATCCTCCTTTCAAAAGGTGCAACTCGGATGGCTTTGAACTGCAATGGGTGGCTTCCACTTGATGTTGCTAGGATGTGGGGGCGTCACTGGCTTGAACCATTGCTGGCTCCGAGTTCTGATACCATCGTATCATCATTCCCTACTTCAAATTATTTGTCGTTGCCCCTCATGAGTGTGCTCAACATAGCCAGGGAATGTGGATTGCATTCTCCTACGACCTCATCTAATGAGATCGACTTCTGTGCTGTCTGCCTGGAGAGGCCATGTACAGTGGCAGCAGAAGGATGCATGCATGAGCTTTGTGTAAGATGTGCACTCTATCTTTGCTCTACAGCCAATGTTTCTTCTGAAATGCATGGCCCTCCTGGTTCTGTCCCTTGTCCCCTTTGTCGACATGGAATTATCTCTTTCGTCAAGTTACCAAGTTTCCAACCAAAAGAAAATAAATTGCATGCGTCTCTCAGCATGTGTACACCATGCATACAGCATCCGCGTGACATAGATCAATCCTCTCTTTCTCATAATACATCGGAAATTCGAAAAAACCGGGTTGCTTCTGTTTCTTCTGAGATGCTTTGCCCTGTCACCTGTACACCATTTCCATCTGTAGCGATTCCTCTATGTACTTGCAACGATGGTCCTTGTCCGCCATTTGAACCTGGTGAAGATGAAACACAAGATGAATCACCTCGTGACTCACAAGCTTCGACAGCAGATCAGGATAAAATGGAAGGACCAAAACTGGTGAAAACAACATGTTCAAGTATGTTTTGGGGTAGAAGAAGTTGCAGCAGGGAGAACCAATGTAATTCAGAAATAAATGCATGA 1542 0.4371 MGNSFGCSASGERLVSAARDGDLVEAKMLLEFNPCLAKYSTFGGLNSPLHFAASKGHNEIVALLLEKGADVNSRNYCGQTALMQACRHGHWEVVQTLMLYRCNVMKADYLSGRTALHFAAVSGHVRCIRLVVADLVPSAPYETLHARVDADVGDGSNTKRKNEQSELSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANASAATYHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLSKGATRMALNCNGWLPLDVARMWGRHWLEPLLAPSSDTIVSSFPTSNYLSLPLMSVLNIARECGLHSPTTSSNEIDFCAVCLERPCTVAAEGCMHELCVRCALYLCSTANVSSEMHGPPGSVPCPLCRHGIISFVKLPSFQPKENKLHASLSMCTPCIQHPRDIDQSSLSHNTSEIRKNRVASVSSEMLCPVTCTPFPSVAIPLCTCNDGPCPPFEPGEDETQDESPRDSQASTADQDKMEGPKLVKTTCSSMFWGRRSCSRENQCNSEINA 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01225 513 Gene3D - 157 270 IPR036770 -
Mepo7g01225 513 ProSiteProfiles Ankyrin repeat profile. 111 132 IPR002110 GO:0005515
Mepo7g01225 513 FunFam E3 ubiquitin-protein ligase XBAT33 6 140 - -
Mepo7g01225 513 ProSiteProfiles Ankyrin repeat region circular profile. 220 245 - -
Mepo7g01225 513 ProSiteProfiles Ankyrin repeat region circular profile. 44 75 - -
Mepo7g01225 513 ProSiteProfiles Zinc finger RING-type profile. 319 369 IPR001841 -
Mepo7g01225 513 SUPERFAMILY RING/U-box 318 375 - -
Mepo7g01225 513 SMART ANK_2a 77 106 IPR002110 GO:0005515
Mepo7g01225 513 SMART ANK_2a 220 252 IPR002110 GO:0005515
Mepo7g01225 513 SMART ANK_2a 111 141 IPR002110 GO:0005515
Mepo7g01225 513 SMART ANK_2a 44 73 IPR002110 GO:0005515
Mepo7g01225 513 SMART ANK_2a 177 206 IPR002110 GO:0005515
Mepo7g01225 513 ProSiteProfiles Ankyrin repeat profile. 220 252 IPR002110 GO:0005515
Mepo7g01225 513 SUPERFAMILY Ankyrin repeat 14 273 IPR036770 -
Mepo7g01225 513 ProSiteProfiles Ankyrin repeat profile. 177 209 IPR002110 GO:0005515
Mepo7g01225 513 ProSitePatterns Zinc finger RING-type signature. 334 343 IPR017907 -
Mepo7g01225 513 ProSiteProfiles Ankyrin repeat region circular profile. 177 206 - -
Mepo7g01225 513 Gene3D - 4 156 IPR036770 -
Mepo7g01225 513 MobiDBLite consensus disorder prediction 465 484 - -
Mepo7g01225 513 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
Mepo7g01225 513 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 111 407 - -
Mepo7g01225 513 ProSiteProfiles Ankyrin repeat region circular profile. 111 132 - -
Mepo7g01225 513 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 305 386 IPR013083 -
Mepo7g01225 513 MobiDBLite consensus disorder prediction 457 485 - -
Mepo7g01225 513 Pfam Ankyrin repeats (3 copies) 182 266 IPR002110 GO:0005515
Mepo7g01225 513 Pfam Ankyrin repeats (many copies) 46 97 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01225 Mepo-Chr7 19773293 19779648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01225 17 241 Miscellaneous Gene Families AT3G12360 27.426 8.17e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01225 K19044 - gmx:100812809 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01225 7 19773293 19779648 Mepo7g01225 7 19773293 19779648 ECH
Mepo7g01225 7 19773293 19779648 Mepo4g04271 4 52480654 52484419 PCT