Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo6g04273 | ATGTGGCGGAGAATCGTTTCTTCTCCTCACCTCAAAACCCTAACTTCTTCATCTCATTCTCATCCTCGATCCGCCTTCGCCGCTCTCCGATTCGCCGGCCTCAGCCGCCACGTCGCCACACAATCAGCTGGTTCGGTGAAGAAAACCGTTGAGGATGTAGTTCCAATTGCTACCGGTCATGAACGTGAGGAGATTCAAGCTGATCTTGAGGGAAGGAATATCCTTGAAATAGACCACCCTGAAGGTCCTTTTGGCACCAAGGAAGCACCTGCTGTTGTTAAGTCTTACTATAACAGAAGGATTGTTGGATGCCCTGGTGGTGAGGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGGAAGGCAAGCCCCATGAATGTCCAGTGTGTGCACAGTATTTTCAGCTTGAAGTGGTGGGACCTGGCGGTGATCCTTATGGACACCATTGA | 453 | 0.5055 | MWRRIVSSPHLKTLTSSSHSHPRSAFAALRFAGLSRHVATQSAGSVKKTVEDVVPIATGHEREEIQADLEGRNILEIDHPEGPFGTKEAPAVVKSYYNRRIVGCPGGEGEDEHDVVWFWLEEGKPHECPVCAQYFQLEVVGPGGDPYGHH | 150 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo6g04273 | 150 | SUPERFAMILY | Rubredoxin-like | 46 | 143 | - | - | |
| Mepo6g04273 | 150 | ProSiteProfiles | Cytochrome c oxidase subunit Vb, zinc binding domain profile. | 45 | 144 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Mepo6g04273 | 150 | Pfam | Cytochrome c oxidase subunit Vb | 50 | 146 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Mepo6g04273 | 150 | CDD | Cyt_c_Oxidase_Vb | 45 | 142 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Mepo6g04273 | 150 | PANTHER | CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL | 1 | 149 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Mepo6g04273 | 150 | FunFam | Cytochrome c oxidase subunit Vb | 46 | 140 | - | - | |
| Mepo6g04273 | 150 | Gene3D | Cytochrome c oxidase, subunit Vb | 46 | 140 | IPR036972 | GO:0005740|GO:0005751|GO:0006123 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo6g04273 | Mepo-Chr6 | 54884374 | 54889490 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo6g04273 | K02265 | - | gmx:100780886 | 230.335 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo2g00235 | 2 | 2671624 | 2677578 | Mepo6g04273 | 6 | 54884374 | 54889490 | ECH | |
| Mepo6g04273 | 6 | 54884374 | 54889490 | Mepo6g04273 | 6 | 54884374 | 54889490 | ECH | |
| Mepo6g04273 | 6 | 54884374 | 54889490 | Mepo2g00235 | 2 | 2671624 | 2677578 | PCT |