LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g00235	ATGTTACGAAGACTGCTCATCTCTTCACAACTCAAAACCCTAATTCCTTCTTCTTCTCTCCGATCTCCTTCCCCCGCCGTCGCTGTTTCCTTACTCTCCCGCCACCACTTCTCTACTCAATCCAGTGACGACAGTACTACTGGAATTAAAAAGAAGGTTGAAGATGTAGTTCCAATTGCTACTGGTCATGAGCGTGAGGAAATTCAGGCTCAACTTGAGGGTAGGGATATTCTTGAAATTGACCATCCTGAAGGTCCATTCGGCACTAAGGAAGCACCTGCTGTTGTTAAATCTTACTACGATAAAAGGATAGTTGGATGCCCAGGTGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGACAAACCTCATGAATGTCCCGTGTGTGCACAGTATTTTGTGCTCGAAGTGGTAGGACCTGGTGGATCACCTTATGGGCACGGCGATCCTGATCACCATCACTAA	480	0.4688	MLRRLLISSQLKTLIPSSSLRSPSPAVAVSLLSRHHFSTQSSDDSTTGIKKKVEDVVPIATGHEREEIQAQLEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCAQYFVLEVVGPGGSPYGHGDPDHHH	159

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g00235	159	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	158	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Mepo2g00235	159	SUPERFAMILY	Rubredoxin-like	50	146	-	-
	Mepo2g00235	159	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	48	147	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Mepo2g00235	159	CDD	Cyt_c_Oxidase_Vb	50	145	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Mepo2g00235	159	Gene3D	Cytochrome c oxidase, subunit Vb	49	143	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Mepo2g00235	159	FunFam	Cytochrome c oxidase subunit Vb	49	143	-	-
	Mepo2g00235	159	Pfam	Cytochrome c oxidase subunit Vb	60	146	IPR002124	GO:0005740\|GO:0005751\|GO:0006123

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g00235	Mepo-Chr2	2671624	2677578	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g00235	K02265		-	gmx:100780886	254.218

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo2g00235	2	2671624	2677578	Mepo6g04273	6	54884374	54889490	ECH
	Mepo2g00235	2	2671624	2677578	Mepo2g00235	2	2671624	2677578	ECH
	Mepo6g04273	6	54884374	54889490	Mepo2g00235	2	2671624	2677578	PCT