Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04148 ATGAAACTCCTCAGAACAATCTTCATCCACCACAAACACCACCATTTCTTCAAACCCAAACGTGTCTTTTCATCTCTAGTTTCACCAAACCCTTCTTCAACAACAACACCTGAAAACACAGAAACCCTACATTCCAATGAAAAAACCCAAAAACCAACCAATACTTGGAGTATGTACGGTAACGTTATTGCAACTAAACAGAAAATCAACAATCACAGCGACGACGACGAAGCCGAGGAAGAAAAACCAAGTGAAAGTGAAAATGGAAGCATGATGAATTTGAAGAACAAAACTATTTTTAAAACGGCGGCGACGGTGGACAAAAGAAGTACTAAGAAGGTGAAGACTCAGTGGGTTTGTTGTAATTGTGGGTATACTGCAGGACAATGGTGGGGTACTTGTCCTTCTTGTACTATGGTTGGAACAATGAAGGAGTTTCATGAAGCTAAACTTGGTGATGGTGTTGATAGTAATAAGGTTAGAACTGGTTTATCTATTTCTGAAGATGTAATGGGTGCTTGGCTTCCACAGAGAGGTGATCAATTGCATCCTGTTAAATTGAGTGAGGTTAATCGTGGGTTCAACGAAAAGGGTTGGAGATTTCCTTTGTCTGGCCCTTTTGGAGATGAAGTTTCTATTGTGCTTGGCGGTGGTCTTGTGCCAGGGTCTTTGAATTTAGTTAGTGGTGATCCCGGTGTTGGGAAGAGTACACTGTTGTTGCAGATGGCAGCATTGATAGCAGACGGATGCAATGGCAGGGACGGTGAGGCCCTTCCAGTTGTATATGTCTCTGGTGAAGAGAGCCTTCAGCAAATTGGTCACAGAGCAGGCCGCCTTGGAATTAATTCTGATATTTATTTGTATTCAAGTACTGATATTGAGGACATAATAAGGATAGCTCAGTCTTTCCCCATTAGAGCCCTGGTTGTTGATTCAATACAGACTGTTTATTTGAAAGGAATAGCAGGAAGTGCTGGAGGGATTGTGCAGGTGAAAGAATGTACTTCAGCTTTGATGCGATTTGCTAAAACGACTAACATCCCCGTACTTTTGATTGGACATGTGACAAAATCTGGAGACATAGCTGGGCCTCGTGTTCTGGAGCATATTGTTGATGTCGTCTTGTACTTGGAAGGTGAGAGGTTCACTTCATATCGAATGCTCCGTGCTGTGAAAAATCGGTTTGGATCCACTGATGAGCTTGGAGTTTTTGAGATGTCAGAATCAGGATTTAAGGCAGTTTCCAATGCAACTGAAATGTTTCTCACTGAACAAGACCCTGATTCAGATGTTTTAGTTGGGTTAGCTTTTACCGTAATAATGGATGGTTCAAGAACTTTCATAATTGAAGTTCAGGCACTCTGCCTTTCACAATCCCCGGTAGGAGGATCAACTTCAAGAGTAGTTAATGGAATTGACACAGATAGAGCTAACATGATCAAATGTGTTCTTATAAAGCAAGCAGGTCTTCATATCCCAGTAAACTCTGTGCATTTGAATGTTGTTAGTGGATTGAAAATGTCTGAGACTGCTGGAGATCTTGCAATAGCAGCTGCAATTTGCAGCAGCTTCCTGGAATACCCTATTCCAAAGGGCATTGCATTCATCGGTGAAATTGGCCTTAGCGGAGAGCTTCGCACGGTTCCTAGAATCGACAAAAGAGTGCATGCATTGGCAAAGTTGGGTTACAAAACATGTGTAGTACCGAAGCAAGCTGTAAAAGCTTTAGGAACTGAAGGTCTAGAAAATATTAAAGTAGTAGGCTGCAAGAATCTGAAGGAGTTTATTAACGCAGTATTCAGTAGATAA 1809 0.4168 MKLLRTIFIHHKHHHFFKPKRVFSSLVSPNPSSTTTPENTETLHSNEKTQKPTNTWSMYGNVIATKQKINNHSDDDEAEEEKPSESENGSMMNLKNKTIFKTAATVDKRSTKKVKTQWVCCNCGYTAGQWWGTCPSCTMVGTMKEFHEAKLGDGVDSNKVRTGLSISEDVMGAWLPQRGDQLHPVKLSEVNRGFNEKGWRFPLSGPFGDEVSIVLGGGLVPGSLNLVSGDPGVGKSTLLLQMAALIADGCNGRDGEALPVVYVSGEESLQQIGHRAGRLGINSDIYLYSSTDIEDIIRIAQSFPIRALVVDSIQTVYLKGIAGSAGGIVQVKECTSALMRFAKTTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYLEGERFTSYRMLRAVKNRFGSTDELGVFEMSESGFKAVSNATEMFLTEQDPDSDVLVGLAFTVIMDGSRTFIIEVQALCLSQSPVGGSTSRVVNGIDTDRANMIKCVLIKQAGLHIPVNSVHLNVVSGLKMSETAGDLAIAAAICSSFLEYPIPKGIAFIGEIGLSGELRTVPRIDKRVHALAKLGYKTCVVPKQAVKALGTEGLENIKVVGCKNLKEFINAVFSR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04148 602 CDD RadA_SMS_N 118 414 - -
Mepo6g04148 602 FunFam DNA repair protein RadA 205 412 - -
Mepo6g04148 602 PANTHER DNA REPAIR PROTEIN RADA 33 601 - -
Mepo6g04148 602 Gene3D - 421 602 IPR014721 -
Mepo6g04148 602 NCBIfam DNA repair protein RadA 113 594 IPR004504 GO:0003684|GO:0005524|GO:0006281
Mepo6g04148 602 SMART AAA_5 221 381 IPR003593 GO:0016887
Mepo6g04148 602 MobiDBLite consensus disorder prediction 70 91 - -
Mepo6g04148 602 PRINTS DNA repair protein radA signature 213 241 - -
Mepo6g04148 602 PRINTS DNA repair protein radA signature 350 378 - -
Mepo6g04148 602 PRINTS DNA repair protein radA signature 311 335 - -
Mepo6g04148 602 PRINTS DNA repair protein radA signature 120 144 - -
Mepo6g04148 602 PRINTS DNA repair protein radA signature 464 487 - -
Mepo6g04148 602 PRINTS DNA repair protein radA signature 385 411 - -
Mepo6g04148 602 MobiDBLite consensus disorder prediction 27 54 - -
Mepo6g04148 602 Pfam AAA domain 216 359 - -
Mepo6g04148 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 406 IPR027417 -
Mepo6g04148 602 SUPERFAMILY Ribosomal protein S5 domain 2-like 392 600 IPR020568 -
Mepo6g04148 602 ProSiteProfiles RecA family profile 1. 200 355 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Mepo6g04148 602 FunFam DNA repair protein radA isogeny 430 602 - -
Mepo6g04148 602 Gene3D - 211 412 IPR027417 -
Mepo6g04148 602 Pfam Subunit ChlI of Mg-chelatase 485 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04148 Mepo-Chr6 53562928 53571428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04148 K04485 - gmx:100791181 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04148 6 53562928 53571428 Mepo6g04148 6 53562928 53571428 ECH
Mepo6g04148 6 53562928 53571428 Mepo1g04352 1 51118972 51127426 PCT