Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04352 ATGTTTTCGTTTTCTGTCTCTCGTTTCCCTTCAACACAATCATTGCCACTCCATAACCCATCACCAACATCAACAACAACAACAACAAACGCAACTTTTCACACCAACCCACCCCACCAAAACGCTTCATCTTCTACCAACAATAACAAAGCTGAAAACTTTCTCAAACAAAACGCCACTAGCAGAGTAAACCCAATTGAGGGTAATGAAAATGAGGTTGTATTTGGAAGAAAGAAGAAAAAGGGTAAGGAAAAAGTTTACTGGGTTTGTAGCAATTGTGGGTATAGTACTGGACAATGGTGGGGTGTTTGTAGATCATGTAGTGTTTCTGGTACTATGAAAGAGTTTCATGAAGTGAAAAGTAGTGAAAAGGTAAGTGGGTTTTCAGTTTTGGAAGATGGGTTGGGGTCTTGGCTTCCGGAGAAGAGTGGCGAGTTGCGGCCTTTGAGATTGTCTGAGGTTAATAGGGGAGTTGATCATTTGCATTGGAGAATTCCTTTATCAGGTCCTTTTGGAAATGAAGTTTCCAGAGTGCTTGGTGGTGGCCTTGTTCCAGGTTCATTGACTTTAGTTGGCGGGGATCCTGGTGTTGGGAAGAGTACTCTCTTGTTGCAGATTGCTGCAATAATTGCCGAAGGGCACACAGATGGTGAAGCATCTTCAGTTGTGTATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGACCGCCTAACAATTGGATCAGATATTTATTTATATTCAAGTAATGATATCGAGGACATATTGAAGAAAGTTCAGTATCTCTCCCCTCGGGCACTAGTTATTGATTCTGTACAAACTGTTTATTTGAAAGGAATAACGGGGAGTCCTGGAGGGATTATGCAGGTTAAGGAATGTACTTCGGCTTTACTGCGATTTGCAAAGACAACAAACATCCCGATTCTATTGATTGGACACGTGACAAAATCTGGAGACATAGCAGGACCTCGTGTCTTGGAGCATATCGTCGATGTTGTTTTGTATATGGAAGGAGAGAAGTACACTTCCCATCGTATGCTTCGAGCTGTGAAAAATCGATTTGGATCCACTGATGAGCTTGGAGTTTTTGAGATGTCACACTCAGGACTTCAGGCTGTTTCAAATGCCAGTGAAATGTTTCTAAGTGAGCAAGACCTAGATTCAGATATTTTAGCTGGACTAGCTGTAGCTGTAATAATGGATGGATCCCGAACATTTCTTATTGAAATTCAGGCACTTTGTCTCTCTGGTTCAACAGGATCAAGGCAATTTAATGGTATCCAAGCAAATAGAGCTGATATGATCATATCTGTCCTTATCAAGCAAGCAGGACTTCGTCTCCAAGAACATGCTGTGTTTTTAAATGTTGTTAGTGGATTGTCAGTGACCGAGACTGCAGGAGATCTTGCAATAGCAGCTGCAATTTGCAGCAGTTGCCTGGAGCTCCCTATTCCAAATGACATCGCATTCATTGGTGAAGTTGGTCTTGGTGGTGAGCTTCGAATGGTTACTAGAATGGAAAAAAGGGTACACACAGTGGCGAAATTGGGTTACAGAATGTGCATAGTACCAAAGGCAGCTGAAAAAGTTTTGGGAACTGAAGGTTTAGAAAAGATCAAAGTTGTTGGGTGCAGGAATCTGAAAGACGTTATCAACACTATATTTCCTAATGTGATGAGAAGAAGCAAGTGA 1701 0.4174 MFSFSVSRFPSTQSLPLHNPSPTSTTTTTNATFHTNPPHQNASSSTNNNKAENFLKQNATSRVNPIEGNENEVVFGRKKKKGKEKVYWVCSNCGYSTGQWWGVCRSCSVSGTMKEFHEVKSSEKVSGFSVLEDGLGSWLPEKSGELRPLRLSEVNRGVDHLHWRIPLSGPFGNEVSRVLGGGLVPGSLTLVGGDPGVGKSTLLLQIAAIIAEGHTDGEASSVVYVSGEESVEQIGNRADRLTIGSDIYLYSSNDIEDILKKVQYLSPRALVIDSVQTVYLKGITGSPGGIMQVKECTSALLRFAKTTNIPILLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYTSHRMLRAVKNRFGSTDELGVFEMSHSGLQAVSNASEMFLSEQDLDSDILAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQFNGIQANRADMIISVLIKQAGLRLQEHAVFLNVVSGLSVTETAGDLAIAAAICSSCLELPIPNDIAFIGEVGLGGELRMVTRMEKRVHTVAKLGYRMCIVPKAAEKVLGTEGLEKIKVVGCRNLKDVINTIFPNVMRRSK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04352 566 Pfam Subunit ChlI of Mg-chelatase 439 529 - -
Mepo1g04352 566 SMART AAA_5 185 343 IPR003593 GO:0016887
Mepo1g04352 566 Gene3D - 174 374 IPR027417 -
Mepo1g04352 566 MobiDBLite consensus disorder prediction 1 49 - -
Mepo1g04352 566 SUPERFAMILY Ribosomal protein S5 domain 2-like 354 558 IPR020568 -
Mepo1g04352 566 CDD RadA_SMS_N 88 376 - -
Mepo1g04352 566 Gene3D - 393 565 IPR014721 -
Mepo1g04352 566 PRINTS DNA repair protein radA signature 273 297 - -
Mepo1g04352 566 PRINTS DNA repair protein radA signature 90 114 - -
Mepo1g04352 566 PRINTS DNA repair protein radA signature 422 445 - -
Mepo1g04352 566 PRINTS DNA repair protein radA signature 347 373 - -
Mepo1g04352 566 PRINTS DNA repair protein radA signature 177 205 - -
Mepo1g04352 566 PRINTS DNA repair protein radA signature 312 340 - -
Mepo1g04352 566 FunFam DNA repair protein RadA 169 374 - -
Mepo1g04352 566 ProSiteProfiles RecA family profile 1. 164 317 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Mepo1g04352 566 Pfam AAA domain 178 321 - -
Mepo1g04352 566 Pfam Rubredoxin metal binding domain 88 115 IPR041166 -
Mepo1g04352 566 NCBIfam DNA repair protein RadA 83 552 IPR004504 GO:0003684|GO:0005524|GO:0006281
Mepo1g04352 566 PANTHER DNA REPAIR PROTEIN RADA 20 560 - -
Mepo1g04352 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 368 IPR027417 -
Mepo1g04352 566 FunFam DNA repair protein radA isogeny 392 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04352 Mepo-Chr1 51118972 51127426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04352 K04485 - gmx:100794165 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04352 1 51118972 51127426 Mepo1g04352 1 51118972 51127426 ECH
Mepo6g04148 6 53562928 53571428 Mepo1g04352 1 51118972 51127426 PCT