Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04125 ATGAACGGTGGTGATGATGTTATTGCAGCAGCTCCGGCCGGTCCACCGGTTCCGTTGGAGTGGAAATTCTCTCAGGTCTTTGGTGAACGTACGGCTGGTGAAGAGGTTCAGGAAGTGGACATAATTTCTGCTATCGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTGGTACTCTTTGAGAGGACAGATACAAAAGATCATGGCGAATCTAGAAGGGATTCAGAGAGGATGGACTATTCTATCAGCAGACATCCTGAATTCCGTTACAAAACAGAGTTTCAGAGTCACGAGCCTGAGTTTGACTACCTTAAGAGTTTGGAGATAGAAGAGAAAATCAACAAAATCAGATGGTGCCAAATAGCTAATGGTGCACTTTTCCTTCTCTCGACAAATGATAAAACCATCAAATTTTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAGTTGCTGAGATGAATGTTGATCCTTCAAAAACAATGGGAAATGGCAGCATTGCTAGTTCAAGCAATTCAAGTAATCCTAGGCCAAGCCTTGAAAATGGAGGATATCCAGATTCAGATAGATCATACAATTATCTCAGCCCTGACTTCTCATTTCCACCGGGAGGCATACCATCACTAAGATTACCAGTGGTAGTAAGTAGCCATGAAACCAGCTTGGTGGCTCGATGTCGTAGAGTTTATGCCCATGCTCACGATTATCATATCAATTCGATTTCAAATAACAGCGATGGCGAAACTTTCATATCAGCCGATGATTTGCGAATAAATCTCTGGAACCTGGAAATAAGCAGTCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAACATGGAGGATCTGACAGAGGTTATAACATCAGCAGAGTTCCACCCTACACATTGTAATACGTTGGCGTATAGCAGTTCAAAGGGTTCAATCCGTCTAATTGATTTGCGGCAATCAGCATTATGTGATTCTCATGCCAAACTATTTGAGGAACAAGAGGCCCCAGGATCCAGATCATTTTTCACAGAGATAATTGCTTCTATATCTGACATAAAATTTGGGAAAGATGGAAGATACATACTGAGCCGTGATTACATGACTTTAAAGTTGTGGGACATCAATATGGATTCAGGTCCAGTTGCAACTTATCAGGTTCATGAGTATCTAAGACCTAAGCTTTGTGATTTATATGAAAACGATTCGATATTTGATAAGTTCGAGTGTTGTCTGAGTGGTGATGGATTGCGAGTAGCAACCGGTTCTTACAGCAATTTATTCCGAGTATTTGGCTGTGCTCCTGGAAGTACTGAAGCTACAACTTTGGAAGCCAGTAAAAACCCAATGAGACGACAAGTTCAGACCCCCTCAAGGCCGTCTCGATCACTGGGAAATAGTATAACACGAGTTGTACGACGGGGAGCGGAAAACCCCGGGGTTGATGCAAACGGGAATTCGTTTGATTTCACAACAAAGTTGTTGCACTTAGCATGGCATCCATCTGAAAATTCAATCGCCTGTGCTGCTGCAAATAGCTTGTACATGTACTATGCATAA 1560 0.4212 MNGGDDVIAAAPAGPPVPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHGESRRDSERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQIANGALFLLSTNDKTIKFWKVQEKKVKKVAEMNVDPSKTMGNGSIASSSNSSNPRPSLENGGYPDSDRSYNYLSPDFSFPPGGIPSLRLPVVVSSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATYQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVQTPSRPSRSLGNSITRVVRRGAENPGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04125 519 Gene3D - 69 517 IPR015943 GO:0005515
Mepo6g04125 519 MobiDBLite consensus disorder prediction 163 185 - -
Mepo6g04125 519 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 106 120 IPR018067 -
Mepo6g04125 519 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 236 250 IPR018067 -
Mepo6g04125 519 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 37 200 - -
Mepo6g04125 519 PIRSF PPA2_B55 15 519 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 SMART WD40_4 106 146 IPR001680 GO:0005515
Mepo6g04125 519 SMART WD40_4 277 317 IPR001680 GO:0005515
Mepo6g04125 519 SMART WD40_4 336 374 IPR001680 GO:0005515
Mepo6g04125 519 SMART WD40_4 32 67 IPR001680 GO:0005515
Mepo6g04125 519 SMART WD40_4 227 266 IPR001680 GO:0005515
Mepo6g04125 519 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 212 515 - -
Mepo6g04125 519 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 18 519 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 Pfam WD domain, G-beta repeat 230 266 IPR001680 GO:0005515
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 323 350 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 379 404 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 238 265 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 266 293 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 405 431 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 122 150 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 294 322 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 93 121 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 351 378 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 488 517 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 46 66 IPR000009 GO:0000159|GO:0019888
Mepo6g04125 519 MobiDBLite consensus disorder prediction 158 191 - -
Mepo6g04125 519 SUPERFAMILY WD40 repeat-like 40 511 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04125 Mepo-Chr6 53407102 53415228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04125 K04354 - gmx:100799449 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04310 1 50526631 50535357 Mepo6g04125 6 53407102 53415228 ECH
Mepo6g04125 6 53407102 53415228 Mepo6g04125 6 53407102 53415228 ECH
Mepo6g04125 6 53407102 53415228 Mepo1g04310 1 50526631 50535357 PCT