Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g04310 ATGAACGGTGGCGATGAGGTTGTTGTAGCTCCGGAGGAACCAGTGCATCCGTTGGAGTGGAAATTCTCGCAGGTTTTTGGTGAACGTGCGGCTGGAGAGGAAGTTCAGGAAGTGGACATAATATCTGCTATTGAATTCGACAAGTCTGGTGATCATCTTGCGACCGGTGATCGTGGTGGTCGAGTAGTTCTCTTTGAGCGGACAGATTCAAAAGATCATGGATCAAGAAGTGATTTGGAGAGGATGGACTATTCTGTTAATAGGCATCCCGAGTTCCGTTACAAAACCGAGTTTCAGAGTCATGAGCCTGAGTTTGACTATCTTAAGAGCTTGGAAATAGAAGAGAAAATTAACAAAATCAAATGGTGCCAAACAGCTAATGGGGCTGTATTCCTTCTATCTACAAACGACAAAACAATCAAATTTTGGAAGGTTCAAGAAAAGAAGGTGAAGAAAATTTCTGACATGAATATTGACTCTTCAAAAGCAACGGGAAATGGATCTATTGCTAGTTCAAGTAATTCCAGTAGCTCTAAGGCACATCTTGCAAATGGAGGACCTTCAGATAAATCATATAGCTATCTAAGCAATGATTTCTCATTTCCACCTGGAGGCCTACCTTCGCTAAAATTACCCTCGGTAGTAGTTAGCCATGAGACCAGTCTGTTGGCTCGATGTCGTAGAGTATATGCACATGCTCATGACTATCACATCAATTCTATTTCAAATAACAGCGATGGAGAAACATTCATATCGGCTGATGATTTGCGAATAAACCTTTGGAACTTAGAAATTAGCAGTCAAAGTTTTAATATAGTCGATGTAAAGCCTGCAAATATGGAGGATCTGACTGAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCATATAGCAGCTCAAAGGGCTCAATTCGTCTTGTTGACTTGCGGCAGTCAGCTTTATGCGATTCTCATGCCAAATTATTTGAGGAACAGGAGGCCCCTGGGTCCAGATCCTTTTTCACTGAGATTATTGCTTCTATCTCAGATATAAAATTTGCAAAGGATGGAAGATATATACTTAGTCGCGATTACATGACTCTGAAGTTATGGGACATAAATATGGATTCTGGCCCAGTTGCAACTTACCGTGTTCACGAGCATTTAAGGCCAAGGCTATGTGATTTATACGAAAACGATTCAATTTTTGATAAGTTTGAATGTTGTCTCAGTGGTGATGGATCGCGTGTTTCAACCGGTTCTTACAGCAATCTATTCCGTGTGTTTGGTTGTGCCCCTGGAAGTACTGAGGCTACAACTTTGGAAGCCAGTAAAAATCCAATGAGACGACAAGTTCCAACGCCTTCAAGGCCTTCTAGATCGATCGGGAACAGCATCACAAGAGTTGTAAGACGCGGAGCTGAGAACACCGGTGTCGACGCAAATGGAAATTCTTTTGATTTCACAACAAAGTTACTACACTTAGCATGGCACCCAAGTGAAAACTCAATTGCTTGTGCTGCTGCAAATAGCTTATACATGTACTATGCATGA 1548 0.4154 MNGGDEVVVAPEEPVHPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDSKDHGSRSDLERMDYSVNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGAVFLLSTNDKTIKFWKVQEKKVKKISDMNIDSSKATGNGSIASSSNSSSSKAHLANGGPSDKSYSYLSNDFSFPPGGLPSLKLPSVVVSHETSLLARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRYILSRDYMTLKLWDINMDSGPVATYRVHEHLRPRLCDLYENDSIFDKFECCLSGDGSRVSTGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPSRSIGNSITRVVRRGAENTGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g04310 515 Gene3D - 206 512 IPR015943 GO:0005515
Mepo1g04310 515 SUPERFAMILY WD40 repeat-like 39 507 IPR036322 GO:0005515
Mepo1g04310 515 Gene3D - 36 200 IPR015943 GO:0005515
Mepo1g04310 515 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 16 515 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 104 118 IPR018067 -
Mepo1g04310 515 Pfam WD domain, G-beta repeat 226 262 IPR001680 GO:0005515
Mepo1g04310 515 SMART WD40_4 223 262 IPR001680 GO:0005515
Mepo1g04310 515 SMART WD40_4 273 313 IPR001680 GO:0005515
Mepo1g04310 515 SMART WD40_4 332 370 IPR001680 GO:0005515
Mepo1g04310 515 SMART WD40_4 31 66 IPR001680 GO:0005515
Mepo1g04310 515 SMART WD40_4 104 144 IPR001680 GO:0005515
Mepo1g04310 515 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 36 196 - -
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 290 318 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 401 427 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 120 148 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 319 346 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 347 374 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 91 119 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 234 261 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 262 289 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 375 400 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 484 513 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 208 511 - -
Mepo1g04310 515 MobiDBLite consensus disorder prediction 163 184 - -
Mepo1g04310 515 PIRSF PPA2_B55 10 515 IPR000009 GO:0000159|GO:0019888
Mepo1g04310 515 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 232 246 IPR018067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g04310 Mepo-Chr1 50526631 50535357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g04310 K04354 - gmx:100799449 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04310 1 50526631 50535357 Mepo6g04125 6 53407102 53415228 ECH
Mepo1g04310 1 50526631 50535357 Mepo1g04310 1 50526631 50535357 ECH
Mepo6g04125 6 53407102 53415228 Mepo1g04310 1 50526631 50535357 PCT