Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04058 ATGAACAACAACGACGACAACAACAACAAAGACACTAGTACCATAGGAATCCTTGATTCTCGATTCAACCAAACCCTCAGAAATGTTCAAGGGTTACTCAAGGGTCGTAGCATTCCTGGTAAAATCTTATTGACCCAGAGAGTAGATCCGATAGATAATTTAGGCTTATACTCGCCAACTTACCAAAGGAGTTCCTCATATAGTGATACTGGCACGAGCGATCGAGCAACTGAGACAGTAGAGGAGGAAGTTCACAGTGGAAGCAAACCATTTGGTATTACCAACGATAGTAAATTAAAAACATCGACCTCACATGTAGAGAACCCAACTGAAGAAGTCCGGAAATCTTCCATGGGTGGTAGGACTACTGATTCTGCAAGAGTTATGAAGTTCACTAAAGTTCTTTCTGGAACCATGGTTATATTAGATAAATTGCGTGAATTAGCTTGGAGTGGTGTTCCAGATTATATGCGTCCTACAGTGTGGAGACTTCTCTTGGGATATGCACCAACTAATTCAGATAGAAGGGAGGGAGTTTTGAGAAGGAAGCGGCTCGAGTATCTTGATTGTGTTTCTCAGTATTATGATATTCCTGATACGGAACGCTCAGACGATGAGATCAGCATGCTTCGCCAGATTGCCGTTGATTGTCCAAGAACTGTACCTGATGTTGCATTCTTCCAGCAACCACAAGTTCAGAAATCACTGGAGCGTATTCTTTACGCATGGGCCATTCGGCATCCAGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTCACGCCATTTTTTGTTGTTTTCCTATCAGAATACTTAGAAGGGAGCATAGGTAACTGGACAATGTCTGATTTATCTTCAGATAAAATCTCTAATGTAGAGGCTGACTGCTATTGGTGCTTGTCAAAATTGCTTGATGGTATGCAAGACCATTACACATTTGCTCAACCAGGAATTCAAAGGCTTGTCTTTAAGTTGAAGGAATTGGTCAGGAGGATTGATGATCCTGTTTCAAGCCATATGGAGAATCAGGGACTAGAATTTCTTCAATTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGTGAGATACCCTTCCATCTTGTCACACGCCTTTGGGACACATATCTAGCCGAAGGAGATGCCTTACCGGACTTCCTTGTGTATATATTTGCTAGTTTTCTTCTTACGTGGTCAGACGAAATTCAGAAGCTTGATTTTCAAGAGTTAGTAATGTTCCTTCAACACCTTCCAACTCAGAACTGGACTGATCAGGAACTCGAGATGGTACTCTCTCGTGCATTTATGTGGCACAGCATGTTTAACAACTCTCCTAGCCATTTAGCTGCCTAA 1350 0.42 MNNNDDNNNKDTSTIGILDSRFNQTLRNVQGLLKGRSIPGKILLTQRVDPIDNLGLYSPTYQRSSSYSDTGTSDRATETVEEEVHSGSKPFGITNDSKLKTSTSHVENPTEEVRKSSMGGRTTDSARVMKFTKVLSGTMVILDKLRELAWSGVPDYMRPTVWRLLLGYAPTNSDRREGVLRRKRLEYLDCVSQYYDIPDTERSDDEISMLRQIAVDCPRTVPDVAFFQQPQVQKSLERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSIGNWTMSDLSSDKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSSHMENQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDEIQKLDFQELVMFLQHLPTQNWTDQELEMVLSRAFMWHSMFNNSPSHLAA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04058 449 FunFam TBC1 domain family member 126 178 - -
Mepo6g04058 449 Pfam Rab-GTPase-TBC domain 156 401 IPR000195 -
Mepo6g04058 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 315 437 IPR035969 -
Mepo6g04058 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 129 339 IPR035969 -
Mepo6g04058 449 Gene3D - 129 180 - -
Mepo6g04058 449 FunFam TBC domain containing protein 182 313 - -
Mepo6g04058 449 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 108 422 - -
Mepo6g04058 449 Gene3D - 314 449 - -
Mepo6g04058 449 MobiDBLite consensus disorder prediction 90 104 - -
Mepo6g04058 449 MobiDBLite consensus disorder prediction 60 121 - -
Mepo6g04058 449 ProSiteProfiles TBC/rab GAP domain profile. 152 379 IPR000195 -
Mepo6g04058 449 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 188 313 - -
Mepo6g04058 449 MobiDBLite consensus disorder prediction 60 74 - -
Mepo6g04058 449 SMART tbc_4 149 405 IPR000195 -
Mepo6g04058 449 FunFam TBC domain containing protein 314 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04058 Mepo-Chr6 52841255 52846941 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04058 K20360 - gmx:100785695 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04058 6 52841255 52846941 Mepo6g04058 6 52841255 52846941 ECH
Mepo6g04058 6 52841255 52846941 Mepo2g02229 2 32055704 32061258 PCT