Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02229 ATGAACAAGCCTCCACGAGAAAATCATGAACGTAACAACAACACTGTTGCTGCTCTTGATTCCAGATTCAGCCAGACCCTACGAAACGTTCAAGGGTTGCTCAAAGGTCGTAGCATGCCCGGTAAAGTATTGATGAGCAGAAGGTCAGAACCTTCTGATAACTTGAACTCAAAGGTATCCTCAACATTCTACAAAAGGAGTTTCTCACACAACGATGCTGGCACAAGTGATCAGATATCTGGTGCAGTAGAGGAGGAAGTTCAGAGTACAAGTAAATCAGCTAGTGCTTCTAATGTTAGTAAGTTAAAAATCTCAACCTCCCTTGGGGAAAACTTATCCGAAGACACCCGCAAGTATACCATTGGCGCTAGAGCTACAGATTCGGCAAGGATTACAAAGTTCAATAAGGTGCTTTCTGGAACAGTGGTTATATTAGACAAATTGCGTGAATTAGCTTGGAGTGGTGTTCCAGATTATATGCGCCCTAAAGTGTGGAGACTCCTCTTGGGATATGAACCACCTAATTCAGATAGAAAGGAGGGAGTTCTGGGAAGGAAGCGCGGAGAGTATCTTGACTGTATTTCTCAGTATTATGATATTCCTGATTCAGAACGTTCAGATGATGAGGTCAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGACGTTACATTCTTCCAGCAACAGCAAGTTCAGAAATCATTGGAACGTATTCTTTATGCATGGGCCATTCGACATCCTGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTTACACCGTTTTTAGTTGTTTTTATATCAGAACACTTAGAAGGGGGTATAGATGATTGGTCAATGTCTGATTTATCTTCAGACAAAATCTCTAATGTAGAGGCTGACTGCTACTGGTGTTTGTCAAAGTTGCTTGACGGTATGCAAGACCATTACACATTTGCTCAACCTGGAATTCAGAGGCTTGTTTTTAAATTGAAGGAATTGGTCAGGAGGATAGATGAGCCTGTTTCACAACATATAGAGGATCAGGGACTTGAATTTCTTCAATTTGCTTTCCGGTGGTTCAACTGTCTTTTGATCCGCGAGATACCATTCGATCTTATCACACGCCTTTGGGACACATATCTAGCTGAAGGAGATGCCTTGCCAGATTTCCTTGTGTATATATTTGCCAGTTTCCTTCTCACGTGGTCAGACAAACTCAAGAGCTTGGAATTCCAGGAGTTGGTAATGTTCCTTCAACACCTTCCAACTCAGAACTGGACTCACCAGGACCTTGAGATGGTGCTTTCCCGGGCATTTATGTGGCACAGCATGTTCAACAACTCTCCAAGCCATTTCGCTAGCTGA 1359 0.4275 MNKPPRENHERNNNTVAALDSRFSQTLRNVQGLLKGRSMPGKVLMSRRSEPSDNLNSKVSSTFYKRSFSHNDAGTSDQISGAVEEEVQSTSKSASASNVSKLKISTSLGENLSEDTRKYTIGARATDSARITKFNKVLSGTVVILDKLRELAWSGVPDYMRPKVWRLLLGYEPPNSDRKEGVLGRKRGEYLDCISQYYDIPDSERSDDEVNMLRQIAVDCPRTVPDVTFFQQQQVQKSLERILYAWAIRHPASGYVQGINDLVTPFLVVFISEHLEGGIDDWSMSDLSSDKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSQHIEDQGLEFLQFAFRWFNCLLIREIPFDLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLKSLEFQELVMFLQHLPTQNWTHQDLEMVLSRAFMWHSMFNNSPSHFAS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02229 452 FunFam TBC domain containing protein 185 316 - -
Mepo2g02229 452 Gene3D - 129 181 - -
Mepo2g02229 452 Pfam Rab-GTPase-TBC domain 159 403 IPR000195 -
Mepo2g02229 452 ProSiteProfiles TBC/rab GAP domain profile. 155 382 IPR000195 -
Mepo2g02229 452 Gene3D - 317 452 - -
Mepo2g02229 452 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 94 425 - -
Mepo2g02229 452 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 318 440 IPR035969 -
Mepo2g02229 452 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 133 342 IPR035969 -
Mepo2g02229 452 SMART tbc_4 152 408 IPR000195 -
Mepo2g02229 452 FunFam TBC domain containing protein 317 452 - -
Mepo2g02229 452 FunFam TBC1 domain family member 129 181 - -
Mepo2g02229 452 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 192 316 - -
Mepo2g02229 452 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02229 Mepo-Chr2 32055704 32061258 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02229 K20360 - gmx:100819281 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04058 6 52841255 52846941 Mepo2g02229 2 32055704 32061258 PCT