Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04024 ATGTTGATATTCATCCTCCTAAGAAGATTTGCTGTCCTGGCATCTTCTCTTTTATCGAGCCAAACTAAAGAGCATGTTACTCGCGGAGCAACTCAACGTCTTCGTCAAAATGGTCTTCTTACTGCTGATGCACTCAACAAAGCTGATGAAGAAACTATCAAAAAACTGATTTACCCTGTTGGGTTTTATATAAGAAAAGCTGGTAACTTGAAGAAAATTGCTGATATCTGTCTCGCAAAGTATGATGGGGACATACCTAACTCAATTGAGGAACTACTCTTACTTCCAGGCGTAGGTCCTAAGATTGCTCATTTGGTTATGATTATTGCATGGAACAATGTCCAAGGGATATGTGTTGATACTCATGTCCACCGCATCTGCAATCGTCTTGGATGGGTTTCGAGACCCGGCACAAAACAGAGAACTTCAATACCCGAAGAAACTAGAAAGGCACTGGAACGGTGGCTTCCGAGGGAAGAATGGGTTCCAATAAATTATCTTTTGGTAGGATTTGGAAGGACAATATGTACTCCTTTACGGCCTCGCTGTGGAGAGTGTGGTGTAAGTAAGTTTTGCCCGTCAGCGTTCAAGGAGACTTCAAGTTCATCTTCCAGGTCCATTAAGTCTCGGTTGAACAAGAAGGCTGAGTGA 651 0.427 MLIFILLRRFAVLASSLLSSQTKEHVTRGATQRLRQNGLLTADALNKADEETIKKLIYPVGFYIRKAGNLKKIADICLAKYDGDIPNSIEELLLLPGVGPKIAHLVMIIAWNNVQGICVDTHVHRICNRLGWVSRPGTKQRTSIPEETRKALERWLPREEWVPINYLLVGFGRTICTPLRPRCGECGVSKFCPSAFKETSSSSSRSIKSRLNKKAE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04024 216 MobiDBLite consensus disorder prediction 196 216 - -
Mepo6g04024 216 FunFam Endonuclease III-like protein 1 6 109 - -
Mepo6g04024 216 SMART ccc3 175 195 IPR003651 GO:0051539
Mepo6g04024 216 PIRSF Nth 7 201 - -
Mepo6g04024 216 SUPERFAMILY DNA-glycosylase 8 199 IPR011257 GO:0003824|GO:0006281
Mepo6g04024 216 ProSitePatterns Endonuclease III iron-sulfur binding region signature. 176 192 IPR004035 -
Mepo6g04024 216 Gene3D - 109 198 IPR023170 -
Mepo6g04024 216 Pfam Helix-hairpin-helix motif 80 107 IPR000445 GO:0003677
Mepo6g04024 216 SMART endo3end 18 174 IPR003265 GO:0006284
Mepo6g04024 216 Pfam HhH-GPD superfamily base excision DNA repair protein 15 140 IPR003265 GO:0006284
Mepo6g04024 216 CDD ENDO3c 10 172 IPR003265 GO:0006284
Mepo6g04024 216 Gene3D Hypothetical protein; domain 2 7 108 - -
Mepo6g04024 216 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 8 205 - -
Mepo6g04024 216 ProSitePatterns Endonuclease III family signature. 83 112 IPR004036 -
Mepo6g04024 216 FunFam Endonuclease III homolog 108 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04024 Mepo-Chr6 52495592 52499128 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04024 K10773 - gmx:100805799 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04024 6 52495592 52499128 Mepo6g04024 6 52495592 52499128 ECH
Mepo6g04024 6 52495592 52499128 Mepo2g02197 2 31711105 31716308 PCT