Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02197 ATGCCTCCATACAAATACATCTCCAAAACAAAAATGTTGGTCGTTCCCTCTTCTTCTCATTGCTTTGTTTTGGGGAGTTGGAGAATCAAAGCTATGATCATGTCTGATACTACAACAACATCCGCTTCCATCAAACCCTCCGACTCCGACCCCACATCCGGCGCTTCAGCTTCCCAACCAGTTCATGTCTACGTCCGAAGAAACAAAAAAGCCAAAGGAATCACCACTACCACAAAACTTCAACAAAATCAACATCTACCTTCAACACAGACTCATAAAAAGTTTGGTTTGCCTGAAATTGAAGACTTTGCATATAAAGGATCAAATGAATTGACTCAGTGTATAAAATCAGAAATGAGCTTAGATGTGACTCCAACTGAAAGTGAAGTTGCTTCTACAACACATAGGGTTAAATCACCTGCACACTGGGAAGAGACGCTTGAGGGTATTCGCAAAATGAGGTGTTCTGGAGATGCACCAGTAGACACTATGGGATGTGAGAAAGCTGGTTCTACACTACCTCCTAAGGAAAGAAGATTTGCTGTCCTGGTATCTTCTCTTTTATCAAGCCAAACCAAGGATCATATCAATCATGGGGCAATCCAACGTCTTCTTCAAAACGATCTGCTTACTCCTGATGCAATTAACAATGCTGAGGAAGAAACCATCAAAAAGTTGATTTACCCAGTTGGATTTTATACGAGAAAAGCCACTAACTTGAAAAAAATTGCAAATATTTGTCTCATGAAGTATGGTGGAGACATACCTAGCAAAATCGAGCAACTACTACAACTTCCAGGCATAGGTCCTAAGATGGCTCATTTGGTTATGAATGTTGCATGGAACAATGTCCAAGGGATATGTGTAGATACTCATGTCCACCGCATTTGCAATCGGCTAGGTTGGGTGTCAAAATTGGGCACGAAACAGAAAACTTTAACACCTGAAGAGACAAGAGTGTCGCTGCAACTGTGGCTTCCAAAGGAAGAATGGGATCCAATTAATCCTCTATTGGTTGGATTTGGACAGACAATTTGTACACCTCTAAGACCTCGCTGTGGAGAATGTAGTATAAGTCACTTGTGTCCATCCGCGTTCAAGGAGGCCGCAGGTTCAAGCCCAGTTTCCAAATCCACCAAGTCCGGAAGGAATAAGAAGCGCTAA 1164 0.421 MPPYKYISKTKMLVVPSSSHCFVLGSWRIKAMIMSDTTTTSASIKPSDSDPTSGASASQPVHVYVRRNKKAKGITTTTKLQQNQHLPSTQTHKKFGLPEIEDFAYKGSNELTQCIKSEMSLDVTPTESEVASTTHRVKSPAHWEETLEGIRKMRCSGDAPVDTMGCEKAGSTLPPKERRFAVLVSSLLSSQTKDHINHGAIQRLLQNDLLTPDAINNAEEETIKKLIYPVGFYTRKATNLKKIANICLMKYGGDIPSKIEQLLQLPGIGPKMAHLVMNVAWNNVQGICVDTHVHRICNRLGWVSKLGTKQKTLTPEETRVSLQLWLPKEEWDPINPLLVGFGQTICTPLRPRCGECSISHLCPSAFKEAAGSSPVSKSTKSGRNKKR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02197 387 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 65 379 - -
Mepo2g02197 387 CDD ENDO3c 180 342 IPR003265 GO:0006284
Mepo2g02197 387 Pfam Helix-hairpin-helix motif 250 278 IPR000445 GO:0003677
Mepo2g02197 387 SMART ccc3 345 365 IPR003651 GO:0051539
Mepo2g02197 387 MobiDBLite consensus disorder prediction 40 60 - -
Mepo2g02197 387 ProSitePatterns Endonuclease III iron-sulfur binding region signature. 346 362 IPR004035 -
Mepo2g02197 387 FunFam Endonuclease III homolog 278 368 - -
Mepo2g02197 387 Hamap Endonuclease III-like protein 1 [NTHL1]. 139 368 IPR030841 GO:0003906|GO:0005634|GO:0006281|GO:0006285|GO:0019104
Mepo2g02197 387 FunFam Endonuclease III-like protein 1 175 279 - -
Mepo2g02197 387 SUPERFAMILY DNA-glycosylase 153 375 IPR011257 GO:0003824|GO:0006281
Mepo2g02197 387 ProSitePatterns Endonuclease III family signature. 253 282 IPR004036 -
Mepo2g02197 387 Gene3D - 285 362 IPR023170 -
Mepo2g02197 387 MobiDBLite consensus disorder prediction 40 59 - -
Mepo2g02197 387 Gene3D Hypothetical protein; domain 2 175 284 - -
Mepo2g02197 387 SMART endo3end 188 344 IPR003265 GO:0006284
Mepo2g02197 387 Pfam HhH-GPD superfamily base excision DNA repair protein 184 312 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02197 Mepo-Chr2 31711105 31716308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02197 K10773 - gmx:100818398 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04024 6 52495592 52499128 Mepo2g02197 2 31711105 31716308 PCT