Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03896 ATGGAGTTTCTCACTTTACTTTTTATTTTTACAACAATGCACTTGTGTTTCCTGATCTGGAAAAAATTTGATCAGAGAAGGGACCAAGAGTGTTACATATTAAACTATCAATGTTACAAGCCAGGTGATGAAAGAAAACTTGGAAGTGAAAAATGTGGAAAGATTATAGGAAACAATGAGAATATTGGTCTTGATGAGTGCAAGTTCTTCCTCAAAGCCGTTGTCAACTCAGGCATTGGTGAGGAAACTTATGCTCCAAGAAACTTCATCGAAGGCCGAACTGTAAACCCAACGATGGAAGACGAAGTGGAGGAGATGGAAGAGTTTTGTAAGGACAGCATTGCAAAACTTCTAAAAAAATCAGGCATTTCACCTTCGGAGATCGATATTCTTGTGGTAAATGTATCTTTATTCTCTTCTGTGCCTTCTTTAACTTCAAGAATCATTAACCATTACAAAATGAGAGAGGATATAAAAGCTTATAACCTATCTGGTATGGGTTGTAGTGCTAGTCTAATATCATTAGACGTTATTCAAAACATTTTCAAGTCACAAAAGAACAAGTATGCTCTTTTGTTAACATCAGAGTCTCTTAGTACAAATTGGTATTCAGGAAACAATAGGTCAATGATTCTTGCAAATTGTCTTTTCCGTACCGGCGGTTGTGCAATTCTTCTCACAAATAAAAGATCCTTAAAACACAAAGCTATACTGAAGTTGAAGTGTCTAGTTAGAACTCATCATGGTGCTAGAGATGATGCTCATAACTGTTGCAGTCAAAAAGAAGATGAACAAGGTAAACTTGGTTTTTACCTAGCTAAAGATCTTCCAAAAGCAGCCACAAGAGCTTTTACTGATAATTTAAGGGTGTTATCACCTAAAATTTTACCAGCAAGGGAATTACTTAGGTATATGTTAATGTCACTCATAAAAAAAGTGATAAAATATTTTGCTCCAAAGTCAGCTGCAAGATGGTTTGGAACAAGTAACAAATCACCAGTGAATTTCAAAACTGGTGTTGATCATTTTGTGCTCCACACTGGAGGAAAAGCAGTGATAGATGGAATTGGGATGAGTTTAGATCTGAATGATTATGACCTAGAACCAGCAAGAATGTCCTTACATAGATTTGGTAACACATCAGCAAGTAGTTTATGGTATGTGTTGGGGTATATGGAAGCTAAGAAGAGGTTGAAAAAAGGTGAGAGAGTATTGATGATAAGTTTAGGTGCTGGCTTTAAATGCAACAGTTGTTATTGGGAAGTAATGAGAGATGTTGTTGGTGATGATAGAAATGTGTGGGACGATTGCATTGATTACTATCCACCACACTCTTTGGCCAACCCATTCATGGAGAAGTACGGATGGGTTAACAACATTGAAGATCCAAGCACTTTCAAACTCAAACTTGCTGAGTTTCTTCTCAGTCTTAAGTGA 1437 0.366 MEFLTLLFIFTTMHLCFLIWKKFDQRRDQECYILNYQCYKPGDERKLGSEKCGKIIGNNENIGLDECKFFLKAVVNSGIGEETYAPRNFIEGRTVNPTMEDEVEEMEEFCKDSIAKLLKKSGISPSEIDILVVNVSLFSSVPSLTSRIINHYKMREDIKAYNLSGMGCSASLISLDVIQNIFKSQKNKYALLLTSESLSTNWYSGNNRSMILANCLFRTGGCAILLTNKRSLKHKAILKLKCLVRTHHGARDDAHNCCSQKEDEQGKLGFYLAKDLPKAATRAFTDNLRVLSPKILPARELLRYMLMSLIKKVIKYFAPKSAARWFGTSNKSPVNFKTGVDHFVLHTGGKAVIDGIGMSLDLNDYDLEPARMSLHRFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDVVGDDRNVWDDCIDYYPPHSLANPFMEKYGWVNNIEDPSTFKLKLAEFLLSLK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03896 478 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 456 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mepo6g03896 478 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mepo6g03896 478 CDD CHS_like 65 420 - -
Mepo6g03896 478 SUPERFAMILY Thiolase-like 243 423 IPR016039 GO:0016746
Mepo6g03896 478 Gene3D - 53 421 IPR016039 GO:0016746
Mepo6g03896 478 SUPERFAMILY Thiolase-like 18 231 IPR016039 GO:0016746
Mepo6g03896 478 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 340 421 IPR013747 -
Mepo6g03896 478 PANTHER 3-KETOACYL-COA SYNTHASE 12 443 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03896 Mepo-Chr6 51214702 51217294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03896 19 471 Acyl Lipid Metabolism Gene Families AT2G28630 66.083 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03896 K15397 - gmx:100776947 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03896 6 51214702 51217294 Mepo6g03896 6 51214702 51217294 ECH
Mepo6g03896 6 51214702 51217294 Mepo2g01980 2 28795981 28797590 PCT