Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01980 ATGGAGTTCCTCTCTTTACTTTATGTAGTTCCAGCATTGTACCTATGTTTCCTTATCTGGAAACTATTCGATCAAAAGAGGGACCAAGAGTGTTACATATTAGATTACCAATGTTACAAGCCAACACAAGATAGAATGCTAGGGACAGAATTTTGCGGCAAAGTAATCAAAAGAACAGAAAATTTGGGTCTAGATGAATACAAATTTCTCCTCAAAGCCATTGTAAGTTGTGGCATTGGCGAACAAACTTACGCCCCAAGAAACGTCTTTGAAGGCCGCGAAGCATCCCCAACACTGAACGATGGGATCTCAGAGATGCAAGAATTTTTTGACGACAGCATTGCAAAACTTCTCTCAAGGTCAGCGATTTGCCCTTCTGAAATTGATGTTCTTGTCGTCAACATCTCAATGCTCTCCGTTCTTCCTTCTTTATCGTCGCGAATTATTAACCGTTACAAAATGAGACACGACATAAAAGTGTACAATCTCACCGCAATGGGTTGCAGTGCTAGTCTTATATCACTAGATATTGTTAAAAACATTTTCAAATCACAGAGAAATAAGTTGGCACTTTTGGTCACATCAGAGTCTCTCTGTCCAAATTGGTATACTGGCAATGATAAATCAATGATCCTAGCCAACTGTCTTTTCCGTTCTGGAGGTTGCGCGGTTCTTTTAACAAACAAAAGATCCTTAAAGAACAGAAGTATATTGAAATTGAAGTGTTTAGTACGAACGCACCACGGCGCCAGAGATGACTCTTTCACTTGCTGCACTCAAAAGGAAGATGAGCAGGGTAGGCTTGGTGTTCACTTAGGGAAAACTCTTCCAAAAGCAGCAACAAGAGCTTTTATTGATAATTTAAGGGTAATTTCACCCAAAATTTTGCCAACAAAGGAAATACTTAGGTTTCTTGTAGTCTTACTTTTCAAGAAACTTAAGATAACTAGTGGTGGAACAAAAACTAAAAAATCACCATTGAATTTCAAAACTGGTGTTGATCATTTTTGCCTCCACACAGGAGGTAAAGCAGTGATTGATGGAATTGGAATGAGTTTAGATCTTAATGAATATGATCTTGAGCCAGCAAGGATGACACTACATCGTTTTGGTAACACTTCTGCAAGTAGTTTGTGGTATGTGTTAGGGTACATGGAAGCAAAAAAGAGGCTCAAAAAAGGTGATAGAGTTTTTATGATAAGCTTTGGTGCTGGATTTAAATGCAATAGTTGCTTGTGGGAAGTGATGAAAGATGTTGGAGATGCAAATGTATGGGAAGATTGTATTGATAATTATCCACCAAAGTCATTGGTCAATCCTTTCATGGAGAAGTATGGTTGGGTCAATGAAGTTGAGGATCCAAACAATTATGAACTTCCTGATTTTCTTAAGTGA 1395 0.3828 MEFLSLLYVVPALYLCFLIWKLFDQKRDQECYILDYQCYKPTQDRMLGTEFCGKVIKRTENLGLDEYKFLLKAIVSCGIGEQTYAPRNVFEGREASPTLNDGISEMQEFFDDSIAKLLSRSAICPSEIDVLVVNISMLSVLPSLSSRIINRYKMRHDIKVYNLTAMGCSASLISLDIVKNIFKSQRNKLALLVTSESLCPNWYTGNDKSMILANCLFRSGGCAVLLTNKRSLKNRSILKLKCLVRTHHGARDDSFTCCTQKEDEQGRLGVHLGKTLPKAATRAFIDNLRVISPKILPTKEILRFLVVLLFKKLKITSGGTKTKKSPLNFKTGVDHFCLHTGGKAVIDGIGMSLDLNEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDRVFMISFGAGFKCNSCLWEVMKDVGDANVWEDCIDNYPPKSLVNPFMEKYGWVNEVEDPNNYELPDFLK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01980 464 SUPERFAMILY Thiolase-like 27 416 IPR016039 GO:0016746
Mepo2g01980 464 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 447 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mepo2g01980 464 CDD CHS_like 12 413 - -
Mepo2g01980 464 Pfam FAE1/Type III polyketide synthase-like protein 25 313 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mepo2g01980 464 Gene3D - 73 415 IPR016039 GO:0016746
Mepo2g01980 464 PANTHER 3-KETOACYL-COA SYNTHASE 15 434 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mepo2g01980 464 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 333 414 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01980 Mepo-Chr2 28795981 28797590 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01980 14 461 Acyl Lipid Metabolism Gene Families AT1G07720 72.078 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01980 K15397 - gmx:100809149 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03896 6 51214702 51217294 Mepo2g01980 2 28795981 28797590 PCT