Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03868 ATGCCAATGCCATCATCACTCCCATTTTCACTCTATATGGTTCCTTTCTTCTCTCTTTTATTCTCATTCATGATTTGTAGTAGTAATGCTGGGGTTCCACCTTCACCAGGGTACTACCCTAGTTCCAAAGTAAGCACTATTAGCTTTGATCAAGAATTTAGAAACCTATGGGGAGCTCAGCATCAGAAACTAGACCATGGATCATTATCAATCTGGCTTGACTCTACCACAGGGAGTGGATTCAAGTCATATCACTCTTATAAATCTGGATATTTTGGTACTGCGGTTAAGCTTCAACCAGGTTATACTGCAGGAGTCAATACAAATTTATATCTTTCAAACATAGAAGATCACAAAGGAAACCATGATGAAATAGACATTGAGTTCCTTGGTACTACACAAGATAAGCCATATGTGTTGCAGACAAATGTGTACATTAAAGGAAGTGGAGATGGGAAGATTATAGGAAGAGAGATGAGATTTCACCTTTGGTTCGACCCAACACAAGATTTTCACAACTATGCCATTTTATGGAAACCTAGTGAGATCATATTTTTAGTGGATGATGTTCCAATAAGGAGGTATCCTAGGAAGAGTGATGCAACATTCCCTTCAAGACCAATGTATGTGTATGGATCAATCTGGGATGCATCTGCATGGGCTACAGAGAATGGAAAATATAAAGCAAATTATACTTACCAACCCTTCATTGGAAGATACCAAAACTTCAAACTACAAGGTTGTACCACTGATTCCACCTCCTCATGCCGGACGCCTTCTGTCTCACCTCCCGGCTATGGCGGCAAGCTGAGCCGTCAGCAAAATGTTGCAATGCAATGGGTCCAAAAAAATTACTTGGTCTATGATTATTGTCATGATCCTAAGAGAGACCATACACTTACTCCAGAATGCTAA 915 0.4 MPMPSSLPFSLYMVPFFSLLFSFMICSSNAGVPPSPGYYPSSKVSTISFDQEFRNLWGAQHQKLDHGSLSIWLDSTTGSGFKSYHSYKSGYFGTAVKLQPGYTAGVNTNLYLSNIEDHKGNHDEIDIEFLGTTQDKPYVLQTNVYIKGSGDGKIIGREMRFHLWFDPTQDFHNYAILWKPSEIIFLVDDVPIRRYPRKSDATFPSRPMYVYGSIWDASAWATENGKYKANYTYQPFIGRYQNFKLQGCTTDSTSSCRTPSVSPPGYGGKLSRQQNVAMQWVQKNYLVYDYCHDPKRDHTLTPEC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03868 304 Pfam Glycosyl hydrolases family 16 50 232 IPR000757 GO:0004553|GO:0005975
Mepo6g03868 304 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 269 304 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Mepo6g03868 304 PIRSF EndGlu_transf 11 304 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mepo6g03868 304 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 7 240 IPR000757 GO:0004553|GO:0005975
Mepo6g03868 304 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 304 IPR013320 -
Mepo6g03868 304 Gene3D - 29 304 - -
Mepo6g03868 304 FunFam Xyloglucan endotransglucosylase/hydrolase 36 304 - -
Mepo6g03868 304 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 46 304 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03868 Mepo-Chr6 50973307 50975661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03868 16 304 Glycoside Hydrolase AT3G44990 64.948 3.03e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03868 K08235 - gmx:100781528 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03868 6 50973307 50975661 Mepo6g03868 6 50973307 50975661 ECH
Mepo6g03868 6 50973307 50975661 Mepo2g01810 2 26615484 26618336 PCT