Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01810 ATGCCATTATCATCACAATCCTTTAATTTCTTCCATATGGTTCCTATCTTCTCTTTTGTTGTACTTTCACTCACAATATTTGGTTCTAATGCTCAGGGTCCACCTTCACCTGGCTACTACCCTAGTTCCAAAATTAGTCCTATATCATTTAGTCAAGGCTTTAGAAACCTTTGGGGACCTCAACATCAAAGATTGGACCAAAGCTCTTTAACAATATGGCTTGACTCGAACTCAGGTAGTGGATTCAAGTCACTTCACTCTTATAAATCTGGATACTTTGGTGCTGCAATTAAGCTTCATCCTGGCTATACTGCTGGAGTTATTACTTCTCTCTATCTTTCTAATAATCAAGACTTCCCAGGAAACCATGATGAAATTGACATTGAGTTTCTTGGAACTACACCTGGTAAGCCATATGTGTTGCAGACAAATGTATATATGAGAGGAAGTGGAGATGGGAACATTATAGGGAGAGAGATGCAATTTCATCTTTGGTTTGATCCAACTCAAGATTTTCACAACTATGCTATTCTATGGAAACCCAGTGAGATAATATTTTTAGTAGATGATGTGCCCATAAGAAGGTATCCTAGGAAAAGTGATGCCACCTACCCTACAAGACCAATGTATCTCTATGGATCAATTTGGGATGCATCTTCTTGGGCAACAGAAGATGGAAAATACAAAGCTGATTATAAATATCAACCCTTTGTTGGAAGGTACACAAACTTCAAATTACAAGGTTGTACCATTCAAAGCCCTGCCTCATGCCAATCACCATCTGTCTCTCCATCTGGATATGGTAGCCTTAGCCCTCAACAATACATGGCCATGCAATGGGTCCAAAGCAAGTACTTGGTATACAATTATTGTCATGACCCTAGAAGGAACCACAATCTTATCCCTGAGTGTTAA 915 0.3913 MPLSSQSFNFFHMVPIFSFVVLSLTIFGSNAQGPPSPGYYPSSKISPISFSQGFRNLWGPQHQRLDQSSLTIWLDSNSGSGFKSLHSYKSGYFGAAIKLHPGYTAGVITSLYLSNNQDFPGNHDEIDIEFLGTTPGKPYVLQTNVYMRGSGDGNIIGREMQFHLWFDPTQDFHNYAILWKPSEIIFLVDDVPIRRYPRKSDATYPTRPMYLYGSIWDASSWATEDGKYKADYKYQPFVGRYTNFKLQGCTIQSPASCQSPSVSPSGYGSLSPQQYMAMQWVQSKYLVYNYCHDPRRNHNLIPEC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01810 304 FunFam Xyloglucan endotransglucosylase/hydrolase 37 304 - -
Mepo2g01810 304 PIRSF EndGlu_transf 11 304 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mepo2g01810 304 Gene3D - 30 304 - -
Mepo2g01810 304 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 49 304 IPR044791 GO:0004553
Mepo2g01810 304 SUPERFAMILY Concanavalin A-like lectins/glucanases 50 304 IPR013320 -
Mepo2g01810 304 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 29 241 IPR000757 GO:0004553|GO:0005975
Mepo2g01810 304 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 269 304 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Mepo2g01810 304 Pfam Glycosyl hydrolases family 16 52 233 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01810 Mepo-Chr2 26615484 26618336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01810 17 304 Glycoside Hydrolase AT3G44990 63.918 1.56e-138 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01810 K08235 - gmx:100781528 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03868 6 50973307 50975661 Mepo2g01810 2 26615484 26618336 PCT