Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03826 ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGCTGCTTCAATCTTCCTTCCTACACTTGCATTCGTGAAGGTCCCGATCACGCGCCGAGGTTTAAAGCTACCGTTAACTTTAACGGCGAGATCTTCGAAAGTCCTCACTACTGTTCAACTCTCCGTCAAGCTGAACACTCCGCCGCTGAAGTTGCTCTTAATTCGCTTTCTCACCGTGGTCCTTCTCACTCTCTCGCCGCTAAGATCCTCGATGAGACTGGAGTCTACAAGAACCTCTTGCAAGAAATTGCACAGCGAGTAGGGGCTCCATTGCCTCAGTACACAACGTACAGATCAGGCCTTGGACATTTACCTGTTTTTACTGGGATAGTAGAATTGGCTGGAATCACATTTACTGGTGAACCTGCGAAGAATAAGAAACAAGCCGAGAAAAATGCAGCTATGGCAGCTTGGTCATCTTTAAAGCAATTGGCAAAAGAGACCGCTAGCTCTTCAACTGAACCGGAGAACAATGACGAATTAGAACAGATCACTATAGCACGGGCTTTACTGAACTACCGTCTGAAGGAAAAGATGTCAATGTCTAATCCAAATGCTCGGATTCCATTTCAGAAGAAGTTTCAGATTCAAAATATCAGGCCAACTAGTTCCCAATCTCCTGCCACCACATCAAAGATCCTTCCTCTAATTTGCCAAAAGACAGGACCTCGAAACAGACCTTCATCGGCAACAGCAAATGAAAATCCTCGAAGCAGGCATCCGCCAGCCGCAGCAACCAGTGACAAGTCCATTTTGCAGCAGCCACAATCTTCTGCAATAGAAAGCCGGGTGACCCGTCCTCTGAGGTTCCCTGCAGCAGGAGCACCACCTTATGTTCCTATTCGACAAATGAGACCTTGCCATGGGATTGCACCTGCAGTGTCTGTTAGGACTGTAATACCTGTGTTCTCTGCACCACCTCTTCCACCACCTACCTCAGTGCATCAGATAATACGGGCTCCTCCTGTACGAATTGCTCCTCCAGTCAGTATTCGGCAAGCTGTCCCTGTATTTGCTGCCCCACCACCAAGAAAAGATGAACTTGCCCCCGTCCAAAAAGATCTACCTGCCAGTAGTACCCCTGTCGAGCAAGATAAGCTTCCAGCCAAAATTATTGAGATGGACAAGACTGAGAACAATTCACCACAACCAGAGACTTTGCAGAGTTTGGAGCAGTTGAAAATTTGA 1224 0.4747 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRLKEKMSMSNPNARIPFQKKFQIQNIRPTSSQSPATTSKILPLICQKTGPRNRPSSATANENPRSRHPPAAATSDKSILQQPQSSAIESRVTRPLRFPAAGAPPYVPIRQMRPCHGIAPAVSVRTVIPVFSAPPLPPPTSVHQIIRAPPVRIAPPVSIRQAVPVFAAPPPRKDELAPVQKDLPASSTPVEQDKLPAKIIEMDKTENNSPQPETLQSLEQLKI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03826 407 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Mepo6g03826 407 FunFam Double-stranded RNA-binding protein 2 84 155 - -
Mepo6g03826 407 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Mepo6g03826 407 Gene3D - 2 83 - -
Mepo6g03826 407 MobiDBLite consensus disorder prediction 353 407 - -
Mepo6g03826 407 MobiDBLite consensus disorder prediction 388 407 - -
Mepo6g03826 407 FunFam Double-stranded RNA-binding protein 2 1 70 - -
Mepo6g03826 407 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Mepo6g03826 407 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Mepo6g03826 407 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
Mepo6g03826 407 SUPERFAMILY dsRNA-binding domain-like 88 159 - -
Mepo6g03826 407 PANTHER - 1 355 - -
Mepo6g03826 407 Gene3D - 84 155 - -
Mepo6g03826 407 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Mepo6g03826 407 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Mepo6g03826 407 SMART DRBM_3 2 69 IPR014720 -
Mepo6g03826 407 SMART DRBM_3 88 154 IPR014720 -
Mepo6g03826 407 MobiDBLite consensus disorder prediction 204 277 - -
Mepo6g03826 407 MobiDBLite consensus disorder prediction 204 248 - -
Mepo6g03826 407 MobiDBLite consensus disorder prediction 259 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03826 Mepo-Chr6 50367017 50371281 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03826 - - cam:101510954 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03826 6 50367017 50371281 Mepo6g03826 6 50367017 50371281 ECH
Mepo6g03826 6 50367017 50371281 Mepo2g01871 2 27451660 27456048 PCT