LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g01871	ATGTACAAGAACCAGCTACAAGAGCTGGCACAAAGAAGCTGTTTCAACCTACCTTCATACACGTGCATAAGAGAAGGTCCTGATCACGCGCCGCGTTTCAAAGCTACCGTTAACTTTAACAGCGAGATCTTTGAAAGTCCTCAGTACTGTTCAACACTTCGTCAAGCGGAACATTCAGCTGCTGAGGTGGCACTTAGTTCTTTGTCTCATCGTGGTCCTTCTCATTCTCTTGCTGCAAAAATCCTTGATGAGACGGGAGTGTACAAGAATCTCTTGCAAGAAATTGCACAAAGGGTAGGGGCTCCGTTGCCGCAGTACACAACTTTCCGGTCAGGCTTAGGACATCTACCTGTTTTTACTGGTACGGTGGAATTAGCTGGAATTACATTCACTGGTGAACATGCCAAGAATAAGAAACAAGCAGAGAAAAATGCAGCTATGGCAGCTTGGTCGTCTCTAAAGCAATTGGCGAAAGAAACTGCAAGCTCTTCAACTGAACAGGAGAACAATGACGAACTAGAACAGATCACCATAGCACGAGCGTTACTGAATTACCGTCTGAAGGAAAAGATGGCAATGTCAAATCCAAATGCTATGATTTCATTTCCAATGAAGTTTCAGTTTCAAAATCCAAGGCCAACCAGCCCTCAACCTCGACCGGCAACATCAAAGATTCTTCCTCTAATTTGCCAAAAGACAGCTCCTCGAAGCAGGCATGCCGCAACGGCTTCAGCCAGCAGCGATCACAGTCCCATTATGTCACCGTTTTCTTCTACACCAGAAAGCCGATGGGCCCGACGCCCTAAATTCCCTGCAGCAGGAGCAGCACCTTATGTTCCCATTCGACATATGCGATCATCATGTCAGGGAGTTGCACCACCAGTTACCATAAGGAATGCAATACCTGTATTCTCCCCTCCACCAGCTGCAGTGTCCCCTCAAGTAATGCGGCCACTTCCAGTACGAGTTGCTCCCCCGATCAATATTCGGCAAGCAGTTCCAGTATATGCTGCTGCTCCACCGGTTCGAAAAGATGAACCTATTCCCATCAGCAAAGGTGATCTGGCACAAACACTAAATGCTGCTACACCGCTTCGAGTAGATGAACCTGTTCTCATCAGTAAAGTCGATCCAGCACCTGCAGTTTATGCCGCTCCACCAGTTCTAATAGACGAACCTGTTACCGTCAGCAAAGTTGATCCATCACCGGCAGAAAATGCTGCCCTACCAATTCCAGTAGATGAACCTGTTCCTATCAGCAAAGATGATCCAGCAGCATCAGCAGTTAAAAAAGATGAAACTGTTCTTGTCAGCAAAGATGACCCAGCACCAACCAGTGATGCAGATAAAACTGACACCAAAACTGAGAATATTCCAGCAGGATCTGAAACAGTGCAGAGGTTGGAGCAGCTGAAAATTTGA	1422	0.4669	MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNSEIFESPQYCSTLRQAEHSAAEVALSSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEHAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEQENNDELEQITIARALLNYRLKEKMAMSNPNAMISFPMKFQFQNPRPTSPQPRPATSKILPLICQKTAPRSRHAATASASSDHSPIMSPFSSTPESRWARRPKFPAAGAAPYVPIRHMRSSCQGVAPPVTIRNAIPVFSPPPAAVSPQVMRPLPVRVAPPINIRQAVPVYAAAPPVRKDEPIPISKGDLAQTLNAATPLRVDEPVLISKVDPAPAVYAAPPVLIDEPVTVSKVDPSPAENAALPIPVDEPVPISKDDPAASAVKKDETVLVSKDDPAPTSDADKTDTKTENIPAGSETVQRLEQLKI	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g01871	473	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	87	155	IPR014720	-
	Mepo2g01871	473	Gene3D	-	84	155	-	-
	Mepo2g01871	473	CDD	DSRM_AtDRB-like_rpt1	1	69	IPR044450	GO:0003725
	Mepo2g01871	473	FunFam	Double-stranded RNA-binding protein 2	1	70	-	-
	Mepo2g01871	473	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	1	70	IPR014720	-
	Mepo2g01871	473	MobiDBLite	consensus disorder prediction	406	473	-	-
	Mepo2g01871	473	SUPERFAMILY	dsRNA-binding domain-like	2	68	-	-
	Mepo2g01871	473	MobiDBLite	consensus disorder prediction	236	264	-	-
	Mepo2g01871	473	MobiDBLite	consensus disorder prediction	425	456	-	-
	Mepo2g01871	473	MobiDBLite	consensus disorder prediction	237	261	-	-
	Mepo2g01871	473	Gene3D	-	2	83	-	-
	Mepo2g01871	473	SMART	DRBM_3	88	154	IPR014720	-
	Mepo2g01871	473	SMART	DRBM_3	2	69	IPR014720	-
	Mepo2g01871	473	CDD	DSRM_AtDRB-like_rpt2	86	154	IPR044451	GO:0003725
	Mepo2g01871	473	FunFam	Double-stranded RNA-binding protein 2	84	155	-	-
	Mepo2g01871	473	Pfam	Double-stranded RNA binding motif	2	68	IPR014720	-
	Mepo2g01871	473	Pfam	Double-stranded RNA binding motif	88	153	IPR014720	-
	Mepo2g01871	473	SUPERFAMILY	dsRNA-binding domain-like	88	158	-	-
	Mepo2g01871	473	PANTHER	-	1	340	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g01871	Mepo-Chr2	27451660	27456048	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g01871	-		-	gmx:100816445	541.191

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo6g03826	6	50367017	50371281	Mepo2g01871	2	27451660	27456048	PCT