Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03780 ATGGGAAACAAAGCGCCCCTTTTGATCATGTTTCTTATTCTTTGTCATGGTGTGTCCATGACAATGGGAATGTGGGTCGAGGCAGAAGATAGATCAAATGGACCTTCAACGCAAGACAAAAAATTGTTCTTGTTGCAAAACTCAAAGCGTGTGGTGAAGACTGACGCAAGAGAGATGAGAGTGTTGGAGAGTCATGGTGGTAGAATATCTGAAAGACGCTTGCACGTTGGTTTTATCACTATGGAACCAAGCTCACTTTTTGTTCCTCAATATCTTGATTCCACTCTCATCATATTTGTCCTTACAGGAGAAGCAAAGGTGGGATTCATATATAAGGATAAATTGGCAGAGAGGGATTTGAAGAAGGAAGATGTGTATCAAATTCCAGCTGGTTCTGTATTTTATTTGTTGAATACTAGGGAGGCTCAAAAGCTTCACATTATTTGTAGCATCGATCCATCCGAGAGTTTGAGAATTGGTATTTTCCAGTCTTTCTATATTGGAGGAGGAGCCCCAGTGTCAGTACTTTCCGGATTCGAGCCTCGAATCCTTGAATCTGCATTTAATAGCTAG 573 0.4101 MGNKAPLLIMFLILCHGVSMTMGMWVEAEDRSNGPSTQDKKLFLLQNSKRVVKTDAREMRVLESHGGRISERRLHVGFITMEPSSLFVPQYLDSTLIIFVLTGEAKVGFIYKDKLAERDLKKEDVYQIPAGSVFYLLNTREAQKLHIICSIDPSESLRIGIFQSFYIGGGAPVSVLSGFEPRILESAFNS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03780 190 CDD cupin_7S_vicilin-like_N 51 189 - -
Mepo6g03780 190 PANTHER OS03G0336100 PROTEIN-RELATED 7 189 - -
Mepo6g03780 190 SUPERFAMILY RmlC-like cupins 42 189 IPR011051 -
Mepo6g03780 190 SMART Cupin_1_3 42 190 IPR006045 -
Mepo6g03780 190 Gene3D Jelly Rolls 34 190 IPR014710 -
Mepo6g03780 190 Pfam Cupin 47 156 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03780 Mepo-Chr6 49997630 49998561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03780 51 188 Miscellaneous Gene Families AT2G18540 30.612 6.57e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03780 - - gmx:100818796 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03780 6 49997630 49998561 Mepo6g03780 6 49997630 49998561 ECH
Mepo6g03780 6 49997630 49998561 Mepo2g01918 2 28120451 28123919 PCT