Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01918 ATGCCATCATCAAACACAGTTATCATCATGGCAAAAACCATAACCACCCTTTTGTTCTTCCTCCTTCTTGGAGGAGTAACCATGACAATCTGTGAAGATGAAGAAAGAGAAGAAGGGTCATCATCAAAAAATTTGTTCATGATGCAAAACTCAAAGAGTGTTGTCAAAACTCATGCAGGAGAATTGAGGTTGTTTAAAAACAATGATGATAGGTTTTTGGATAGGCACATGCACATTGGTTTGCTTAATATGGAACCAAGATCTTTGTTCATTCCTCAGTATCTTGACTCCAATTTGATCATATTTGTGCGTAGAGGGGTTGCAAAGTTGGGATTCATATATGGAGATGAACTAGAGGAAAGGAGAATAAAGACAGGGGATTTGTATGTAATTCCAGCAGGTACTGTATTTTATTTAGTGAATATAGGTGAAGGTCAAAGACTTCATGTCATATGCAGCATTGACTCGTCTACAAGTTTAGGTGATACTTTTCAGCCTTTCTATATTGGTGGTGGAGATAATCAACAATCTGTGCTTGCTGGATTCGGACCGACGATTCTTGAAACTGCATTTAATGAATCAAGAGCAAAGATAGAGAGAATTTTCACCAAGAAACAAGACGGTCCAATTGTGTACATTGATGATTCTCATTCTCCTAGTCTATGGACCAAATTCCTTCAACTGAAGAAGAATGACAAAGTGCAACAACTTAAGACATTGGTACAAAGCAAAGAAGAAGAGGAAGACGAGAAGCAAACAAGTTGGTCATGGAGGAAGCTCATGAAAAGTGTATTAAGAAAAGAGAACAAGAAGATAGAGAACAAAGACAGAGCTGATTCCCCTGATTCTTACAATCTCTATGATAGAAAACCTGATTTCAGAAACGCTTATGGTTGGAGCAGTGCATTGGATGGTGGCGATTATTCTCCGCTCAAAATACCTGATATCGGTGTTTTTCACGTCAATCTCACCGCGGGATCAATGATGGCGCCTCACTTGAATCCAAGTGCAACAGAGTATACCATAGTATTAAGAGGTTATGGAAGAATTCAGATACTATTTCCAAACGGAAGCAATGCAATGGAAGCAGAAATCAAAGTAGGAGACATATTCTACATACCAAGATACTTTCCATTCTGTCAAATAGCAGCAAGAAATGGACCCTTAGAGTTCATTGGATTCACAACCACATCAAAAAAGAGTTATCCACAGTTTCTAGCAGGTGCTGCATCACTTCTTAAGACCATTATGGGACCTGAACTTGCAGCTGCATTTGGTGTGAGTGAGGGCATTATGAAGGATGTTGTTGATGCTCAACATGAAGCTCTAATACTTCCTTCAACATGGGCTGCACCTGGTGGTGGTCGAGGGAAAAAGGAGGAAGATGCTCAAACAAAGGGTGTTAAAGGGTTTGTTAATGATGTGATTATGGATGTTTTTGAATAG 1446 0.3921 MPSSNTVIIMAKTITTLLFFLLLGGVTMTICEDEEREEGSSSKNLFMMQNSKSVVKTHAGELRLFKNNDDRFLDRHMHIGLLNMEPRSLFIPQYLDSNLIIFVRRGVAKLGFIYGDELEERRIKTGDLYVIPAGTVFYLVNIGEGQRLHVICSIDSSTSLGDTFQPFYIGGGDNQQSVLAGFGPTILETAFNESRAKIERIFTKKQDGPIVYIDDSHSPSLWTKFLQLKKNDKVQQLKTLVQSKEEEEDEKQTSWSWRKLMKSVLRKENKKIENKDRADSPDSYNLYDRKPDFRNAYGWSSALDGGDYSPLKIPDIGVFHVNLTAGSMMAPHLNPSATEYTIVLRGYGRIQILFPNGSNAMEAEIKVGDIFYIPRYFPFCQIAARNGPLEFIGFTTTSKKSYPQFLAGAASLLKTIMGPELAAAFGVSEGIMKDVVDAQHEALILPSTWAAPGGGRGKKEEDAQTKGVKGFVNDVIMDVFE 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01918 481 Gene3D Jelly Rolls 276 448 IPR014710 -
Mepo2g01918 481 CDD cupin_7S_vicilin-like_N 54 213 - -
Mepo2g01918 481 Gene3D Jelly Rolls 33 226 IPR014710 -
Mepo2g01918 481 SMART Cupin_1_3 43 199 IPR006045 -
Mepo2g01918 481 SMART Cupin_1_3 284 433 IPR006045 -
Mepo2g01918 481 SUPERFAMILY RmlC-like cupins 51 441 IPR011051 -
Mepo2g01918 481 CDD cupin_7S_vicilin-like_C 291 442 - -
Mepo2g01918 481 Pfam Cupin 284 429 IPR006045 -
Mepo2g01918 481 Pfam Cupin 54 152 IPR006045 -
Mepo2g01918 481 Coils Coil 230 250 - -
Mepo2g01918 481 PANTHER OS03G0336100 PROTEIN-RELATED 16 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01918 Mepo-Chr2 28120451 28123919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01918 41 453 Miscellaneous Gene Families AT2G18540 30.841 1.45e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01918 - - gmx:547942 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03780 6 49997630 49998561 Mepo2g01918 2 28120451 28123919 PCT