Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03583 ATGGCTGCACTAACTTCTTTGTCATTCTCAGCAACTACTCAATGCTCACAGAGAAAATCCACTTTGTCTTCTACTCGTTTCCTTGCTTCAACTTCTGATATGTTTGGAATTCGGACAGATTTCTCGTACCATTGTGTTGGTGTCAGAGTTGGCAATTCTGCTTCTAAAATGGTTATTCGATGCATGTCTTCTGTCACAGATGTTCCCAGCGTTTCTGAGACAAAGCTAAATTTCCTAAAGGCATACAAACGACCAATCCCTAGTATCTATAACAATGTGCTGCAGGAGCTCATTGTTCAACATCATTTAATGAGATACAAGACATCATACCAATATGATTCTGTATTTGCTCTTGGTTTTGTCACTGTCTATGATAAACTCATGGAAGGGTATTCTAGTGAAGAGGAGCGAGATACCATCTTCAAAGCTTATATTAATGCATTGAAGGAAGATCCAGAACAATACAGAGTAGATGCAAAGAAGTTGGAAGATTGGGCTAAGGCACAAAACTCAACCTCACTGGTTGAGTTTTCATCCAAAGAAGGAGAAGTTGAAGGGGTTTTAAAGGATATTGCAAAAAGAGCAGGAGAAAAGGGTGAATTCAGTTATAGCCGTTTCTTTGCAGTAGGCCTTTTTCGCCTTCTTGAATTGGCAAATGCAACAGAACCAACAATTTTAGATAAGCTTTGTGCAGCTTTGAACATCGACAAAAGAAGCGTTGATCGGGACTTGGATGTGTACCGTATGCTGCTTTCCAAGCTGGTTCAAGCAAAAGAGCTGCAAAGGGAATTTATTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGGTGGAGCCACAGAAGGCTAATAATGGGGCCATTACAAATTGA 867 0.4014 MAALTSLSFSATTQCSQRKSTLSSTRFLASTSDMFGIRTDFSYHCVGVRVGNSASKMVIRCMSSVTDVPSVSETKLNFLKAYKRPIPSIYNNVLQELIVQHHLMRYKTSYQYDSVFALGFVTVYDKLMEGYSSEEERDTIFKAYINALKEDPEQYRVDAKKLEDWAKAQNSTSLVEFSSKEGEVEGVLKDIAKRAGEKGEFSYSRFFAVGLFRLLELANATEPTILDKLCAALNIDKRSVDRDLDVYRMLLSKLVQAKELQREFIDREKKKREERVEPQKANNGAITN 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03583 288 Pfam Thylakoid formation protein 71 275 IPR017499 GO:0010207|GO:0015979
Mepo6g03583 288 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Mepo6g03583 288 NCBIfam photosystem II biogenesis protein Psp29 67 272 IPR017499 GO:0010207|GO:0015979
Mepo6g03583 288 MobiDBLite consensus disorder prediction 269 288 - -
Mepo6g03583 288 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 283 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03583 Mepo-Chr6 48084962 48088341 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03583 - - gmx:100814341 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03583 6 48084962 48088341 Mepo6g03583 6 48084962 48088341 ECH
Mepo6g03583 6 48084962 48088341 Mepo2g01356 2 19682484 19687190 PCT