Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01356 ATGGCCGCCGTAACTTCTTCTTTCTCATTCTCAACACTCACTCAATCTTCTCAGAGGAAATTAACAACGCTTTCTTCCACTCGCTTCTTTGGTTCCGATTCAGATGCGGGTCGGTTTCGTTTGAGCATATCGTTGCGTTATGTTGGTGTTCGAACTTCCAATTCCGTTTCCAAATTGGTTGTTCGGTGTTCCTCTTCTGTGTCAGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCAAGGCATATAAGCGACCGATACCTAGTATCTATAACTCCGTGCTACAGGAGCTCATTGTCCAGCAACATTTGATGAGATACAAGAAGTCATACCGTTATGATCCTGTATTTGCTCTTGGCTTTGTCACTGTATATGACCAACTCATGGAAGGGTATCCTAGTGATGAGGATAGAGATGCCATCTTCCAAGCATACATTAACGCATTGAAGGAAGATCCAGCCCAATACAGAGTAGATGCACAGAAGTTAGAAGAGTGGGCTCGTGCTCAAAATGCGACTTCCCTGATTGAGTTTTCATCTAGAGAAGGAGAAGTTGAGGGGACTTTAAAGGATATTGCAGAAAGAGCGGGTGGAAATGGGGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGACTTTTTCGTCTTCTTGAGTTAGCAAATGCAATGGAACCAACAATTTTGGAAAAGCTTTGTTCGGCTTTGAATATCAACAAGAAAAGTGTTGATCGAGATTTGGACGTGTATCGCAATCTGCTTTCTAAGTTGGTACAAGCTAAAGAGCTGCTAAAGGAATACATTGATAGGGAGAAGAAGAAAGTAGAAGAAAGGGCTGAACCACAAAAGGCTAATGAGGCCATTTCAAAATGTTTGGGACAAGAGCAGTTTTCTAACATGATCACCAGATAA 909 0.4169 MAAVTSSFSFSTLTQSSQRKLTTLSSTRFFGSDSDAGRFRLSISLRYVGVRTSNSVSKLVVRCSSSVSDPPTVSETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKKSYRYDPVFALGFVTVYDQLMEGYPSDEDRDAIFQAYINALKEDPAQYRVDAQKLEEWARAQNATSLIEFSSREGEVEGTLKDIAERAGGNGDFSYSRFFAVGLFRLLELANAMEPTILEKLCSALNINKKSVDRDLDVYRNLLSKLVQAKELLKEYIDREKKKVEERAEPQKANEAISKCLGQEQFSNMITR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01356 302 Coils Coil 249 269 - -
Mepo2g01356 302 Hamap Protein Thf1 [thf1]. 67 275 IPR017499 GO:0010207|GO:0015979
Mepo2g01356 302 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 296 IPR017499 GO:0010207|GO:0015979
Mepo2g01356 302 Pfam Thylakoid formation protein 72 277 IPR017499 GO:0010207|GO:0015979
Mepo2g01356 302 NCBIfam photosystem II biogenesis protein Psp29 69 273 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01356 Mepo-Chr2 19682484 19687190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01356 - - aip:107632658 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01356 2 19682484 19687190 Mepo2g01356 2 19682484 19687190 ECH
Mepo6g03583 6 48084962 48088341 Mepo2g01356 2 19682484 19687190 PCT