Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03470 ATGGCTCACCACATCTCTTGCATTCTTCTTCTTCTTTTCTCTCTATCCATTCTTTCTTCTTCATCTTCATTACCAACGAGTCAAATAAACTCAAACTCAATCCTAATAGCACTCCTTGACTCACATTACACTGAACTCACTTACCTAATCGAAAAAGCAAACCTCTTACAAACACTAGAAAACACTGTCTCTAAACACAACATCACTATCTTTGCACCAAACAACGTAGCACTCGAACGTAACCTTGACCCAGATTTCAAACATTTTCTTCTCCAACCCGGTAACATTCTTTCCCTCCAAACCCTCCTTCTTTCCCACGTCATTCCAACCCGAATTCAATCCGGGTCGACCCGTTTCAAATCCATCTCCGATCATCACCTCCACCTTGAAACAAATGTCACCACCGGAGAATTTACGGTGAACCAAGAGAAAGTAACCCACCCGAATGACATTACCCGACCCGACGGTGTTATACATGGCATACAGAAAATTCTTATCCCACGCGCCGTCGTGGATGATTTCAACAACCGTCGTAGTCTCCGTTCCATCACCGCCGTCAAACCAGAAGGAGCACCAGAAGCTGACACGAGAAAATTGAAAAAGAAATCCTCACCGGAAAAAAAACCAGGTTCACCACCGGCGATTCCGATTTACGAAGCTTTATCTCCGGGACCATCACTAGCTCCGGCACCGGCGCCGGGACCAGGAGGACCACACCATCACTTCAACGGAGAATTACAAGTGAAGGATTTCATCAAAACGTTACTACATTACGGTGGTTACAACGAAATGGCGGATATACTCGTAAACCTAACGTCGTTAGCGACGGAGATGAGTCGTTTAGTTTCGGAGGGTTATGTTTTAACGGTTTTGGCCCCAAATGACGAAGCAATGGCGAAGTTAACGACGGAGGAGTTAAGTGAACCGGGTTCACCGGAGGAGATAATGTATTACCATATTATCCCTGAGTATCAAACGGAAGAGAGTATGTATAATGCTGTTAGGAGATTTGGGAAGGTTAGTTATGAGACTTTGAGGTTGAAGCATAAGGTTGTGGCTCAAGAAGCTGATGGGTCGGTTAAATTTGGAGATGGTGATGGGTCGGGTTATTTGTTTGATCCGGATATTTATACGGATGGGAGGATTTCTGTGCAAGGGATTGATGGGGTTTTGTTTCCTGTGAAGGAGAAAGAAGTTGTGCCGGTGGAGCGGGTTAAACCCATTTCGATGATGGGTCAACCCAGGAAAGGCGTCGTTGAACACAGAAGAGGGAAACTACTGGAAACAGCATGTTGGATGCTTGGAACCTTTAGAAACCATTCTAGATTCACCTCTTGTCAATGA 1344 0.4501 MAHHISCILLLLFSLSILSSSSSLPTSQINSNSILIALLDSHYTELTYLIEKANLLQTLENTVSKHNITIFAPNNVALERNLDPDFKHFLLQPGNILSLQTLLLSHVIPTRIQSGSTRFKSISDHHLHLETNVTTGEFTVNQEKVTHPNDITRPDGVIHGIQKILIPRAVVDDFNNRRSLRSITAVKPEGAPEADTRKLKKKSSPEKKPGSPPAIPIYEALSPGPSLAPAPAPGPGGPHHHFNGELQVKDFIKTLLHYGGYNEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDEAMAKLTTEELSEPGSPEEIMYYHIIPEYQTEESMYNAVRRFGKVSYETLRLKHKVVAQEADGSVKFGDGDGSGYLFDPDIYTDGRISVQGIDGVLFPVKEKEVVPVERVKPISMMGQPRKGVVEHRRGKLLETACWMLGTFRNHSRFTSCQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03470 447 ProSiteProfiles FAS1/BIgH3 domain profile. 30 165 IPR000782 -
Mepo6g03470 447 Gene3D FAS1 domain 245 393 IPR036378 -
Mepo6g03470 447 MobiDBLite consensus disorder prediction 183 242 - -
Mepo6g03470 447 SUPERFAMILY FAS1 domain 39 167 IPR036378 -
Mepo6g03470 447 Gene3D FAS1 domain 35 168 IPR036378 -
Mepo6g03470 447 ProSiteProfiles FAS1/BIgH3 domain profile. 248 376 IPR000782 -
Mepo6g03470 447 Pfam Fasciclin domain 271 362 IPR000782 -
Mepo6g03470 447 Pfam Fasciclin domain 42 167 IPR000782 -
Mepo6g03470 447 FunFam Fasciclin-like arabinogalactan protein 16 243 394 - -
Mepo6g03470 447 MobiDBLite consensus disorder prediction 191 207 - -
Mepo6g03470 447 SUPERFAMILY FAS1 domain 227 394 IPR036378 -
Mepo6g03470 447 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 19 444 IPR044654 -
Mepo6g03470 447 SMART fasc_3 289 394 IPR000782 -
Mepo6g03470 447 SMART fasc_3 69 168 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03470 Mepo-Chr6 46891543 46895121 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03470 - - gmx:100782264 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03470 6 46891543 46895121 Mepo2g01563 2 23278434 23283104 PCT