Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01563 ATGGCCATGGATTGCGGCATCTATGGTTTCATCAACATCAAGCACCGCACGTTCTTCTTCTTCTTCATTTTCTTCTTTCTTGTTCTATCTTTTTCATCTTCTTCTTCTTCTTCAACGGTTCAGATAAACTCAAACTCAATCTTAGTGGCTCTACTAGACTCACATTACACAGAACTAGCTGAACTCGTTGAAAAAGCCATGCTTCTACAGACACTAGAAGACACTGTCGGTAAAAACAACATCACAATCTTCGCACCAAAAAACCAAGCTCTTGAACGAGATCTTGACCCGAATTTCAAAACTTTCCTTTTAGAGCCACGAAATCTTAAATCTCTTCAAACTTTGTTAATGTCACATATTATTCCTACAAGAATCAATGGATCTGTATACAACAAAGCCGGGTCGACCCGACATAGAACATTGTCGCTTGAACACAAGTTAGTGATACAGTCAAATGAAACATCGCAACAATGGTTGGTTAATGGAGCTAAGATTGTTCATCTGAATGATGTGACAAGACCTGATGGTGTTATTCATGGAATTGAAAGGCTTCTTATTCCAAGGTCTGTTCAAGATGACTTTAACCGTCGTAGGAGTCTTGTTTCTATTGCTGCAATTAAACCGGAAGGTGCACCGGAGGTTGATCCGAGGACTCACCGGTTGAAAAAGCCGCCACCACCGCAGAATCCTGGCTCGCCTCCGGCTCTTCCTATTTTTGATGCATTGGCTCCTGGACCTTCTCTGGCACCGGCGCCGGCACCAGGACCTGGTGGACCCCACCATCATTTCAACGGCGAGGCACAGGTGAAAGATTTCATCCAGACACTGATACATTATGGAGGTTATAACGAGATGGCAGATATTCTGGTTAACCTAACGTCGTTAGCGACGGAGATGAGTAGGTTAGTATCAGAGGGTTATGTTTTAACAGTTCTAGCTCCAAATGATGAAGCTATGGCTAAGTTAACAACGGACCAGTTGAGTGAACCGGGTTCACCGGAACAAATTATGTACTATCATTTGATTCCTGAGTACCAAACTGAAGAGAGTATGTACAATGCTGTTAGAAGATTTGGGAAGGTGAGGTATGATACTTTGAGATTGCCTCATAAGGTTGATGCTGAAGAAGCTGATGGGTCGGTTAAATTCGGGCATGGTGATGGATCGGCTTATTTGTTTGACCCGGATATTTATACGGATGGGAGGATTTCTGTGCAAGGGATTGATGGTGTTTTGTTTCCACATGAAGAAAAGGAAGAGGTTGTTGATAAGGGTGTGACCCAAGAACGGAAGGGTAAACCCGCTAAGGTTGTGGCCAAGCAAAGAAGAGGAAAATTGCTGGAAACGGCTTGCTGGATGCTTGGAACCTTTGGACAGCATTCTAGATTCAATTGTCAATAA 1401 0.4318 MAMDCGIYGFINIKHRTFFFFFIFFFLVLSFSSSSSSSTVQINSNSILVALLDSHYTELAELVEKAMLLQTLEDTVGKNNITIFAPKNQALERDLDPNFKTFLLEPRNLKSLQTLLMSHIIPTRINGSVYNKAGSTRHRTLSLEHKLVIQSNETSQQWLVNGAKIVHLNDVTRPDGVIHGIERLLIPRSVQDDFNRRRSLVSIAAIKPEGAPEVDPRTHRLKKPPPPQNPGSPPALPIFDALAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLIHYGGYNEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGSPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVDAEEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPHEEKEEVVDKGVTQERKGKPAKVVAKQRRGKLLETACWMLGTFGQHSRFNCQ 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01563 466 Pfam Fasciclin domain 55 187 IPR000782 -
Mepo2g01563 466 Pfam Fasciclin domain 292 414 IPR000782 -
Mepo2g01563 466 ProSiteProfiles FAS1/BIgH3 domain profile. 269 412 IPR000782 -
Mepo2g01563 466 ProSiteProfiles FAS1/BIgH3 domain profile. 43 185 IPR000782 -
Mepo2g01563 466 FunFam Fasciclin-like arabinogalactan protein 16 264 415 - -
Mepo2g01563 466 SMART fasc_3 82 188 IPR000782 -
Mepo2g01563 466 SMART fasc_3 310 415 IPR000782 -
Mepo2g01563 466 MobiDBLite consensus disorder prediction 223 240 - -
Mepo2g01563 466 Gene3D FAS1 domain 262 415 IPR036378 -
Mepo2g01563 466 SUPERFAMILY FAS1 domain 44 188 IPR036378 -
Mepo2g01563 466 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 28 459 IPR044654 -
Mepo2g01563 466 MobiDBLite consensus disorder prediction 208 264 - -
Mepo2g01563 466 Gene3D FAS1 domain 47 188 IPR036378 -
Mepo2g01563 466 SUPERFAMILY FAS1 domain 248 415 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01563 Mepo-Chr2 23278434 23283104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01563 - - adu:107477699 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03470 6 46891543 46895121 Mepo2g01563 2 23278434 23283104 PCT