Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03349 ATGGCGGTTGTTTTTATATTCACCGCCATGTTGTTAACGGCGGCGACGGTGGCTTTTTCTGGATCTCCGGCGACTCTAACGTTGGAAAGAGCTTTTCCGACGAATCATGGAATTGAGCTGAATCAGCTCAAAGCTAGAGACTTGTTAAGGCATGGTAGATTCTTGCAGTCTTCTTCAAATGGTGTTGCTGATTTCGCTGTTCATGGTACCTTTGATCCATTTCAAGTCGGGCTCTATTTTACAAAGGTGCTGTTAGGTACTCCTCCAGTAGAATTTTATGTTCAGATTGACACTGGAAGTGATGTTCTATGGGTCAGTTGCAGCTCCTGCAATGGTTGTCCACAGACAAGTGGGTTACAGATTGAGCTCAATTTTTTCGACCCTAGGAGTTCATCAACATCATCGTTAATCTCTTGTTCTGACAAAAGGTGTAACAGTGGAATACAATCATCAGACGCAACCTGTTCCAGTCAGACCAACCAGTGCTCTTACACTTTCCAGTATGGAGATGGTAGTGGAACCTCAGGCTATTACGTGTCCGATACGATGCATTTGGATACTATTTTTGAGGGATCCGTGTCTACGAATTCTTCAGCTCCTGTAGTTTTTGGTTGTAGTAACCAGCAGAGTGGAGACTTGACAAAATCTGACAGAGCAGTTGATGGTATATTTGGATTTGGGCAACAGCAAATGTCTGTGATCTCACAGCTCTCATCACAAGGGATTGCTTCTGGAGTATTCTCTCATTGTCTTAGAGGAGATAGCGCTGGTGGAGGAATTCTGGTTCTTGGTGAGATTGTGGAGCCTAACATAGTTTATACTCCACTTGTTCCATCACAGCCTCATTACAACTTAAACCTACAGAGCATATCTGTTAACGGCCAGGCGTTGCAAATCGATCCATCAGTTTTTGCAACATCAAGCAACAGAGGCACCATTGTTGATTCTGGAACAACTTTAGCATACCTTGCAGAAGAGGCTTATGATCCCTTTGTCAATGCGATTACAGCTACTATACCACAATCTGTACGTACGGTTGTTTCCAGGGGAAATCAATGTTTCTTAATTACTGACAGTGTCACTGAGATATTTCCTCAAGTAAGTCTGAACTTTGCTGGTGGTGTATCTCTGGCTTTAAGACCACAGGACTACCTTATACAACAGAATTCTATTGGTGGTGCAGCAGTGTGGTGTATTGGCTTTCAGAAAACCCAGGGTCAAGGGGTAACAATTCTAGGAGATCTCGTATTAAAAGACAAAATTGTTGTTTACGATCTGGTCGGTCAACGCATTGGATGGGCTAACTATGACTGTTCTTTGACAGTTAATGTCTCTGCATCAACTGGCACTGGCAGAAGTGAATTTGTGAATGCTGGAGAGATAGGTGGAAGCAATTCTTTACATGATGGACTTAAGTTGTCAAAGACAGGGTTTATAGCTCTCTTTGTATCACTGATTTGCAGCTTTGGTTTTTTATAG 1479 0.4273 MAVVFIFTAMLLTAATVAFSGSPATLTLERAFPTNHGIELNQLKARDLLRHGRFLQSSSNGVADFAVHGTFDPFQVGLYFTKVLLGTPPVEFYVQIDTGSDVLWVSCSSCNGCPQTSGLQIELNFFDPRSSSTSSLISCSDKRCNSGIQSSDATCSSQTNQCSYTFQYGDGSGTSGYYVSDTMHLDTIFEGSVSTNSSAPVVFGCSNQQSGDLTKSDRAVDGIFGFGQQQMSVISQLSSQGIASGVFSHCLRGDSAGGGILVLGEIVEPNIVYTPLVPSQPHYNLNLQSISVNGQALQIDPSVFATSSNRGTIVDSGTTLAYLAEEAYDPFVNAITATIPQSVRTVVSRGNQCFLITDSVTEIFPQVSLNFAGGVSLALRPQDYLIQQNSIGGAAVWCIGFQKTQGQGVTILGDLVLKDKIVVYDLVGQRIGWANYDCSLTVNVSASTGTGRSEFVNAGEIGGSNSLHDGLKLSKTGFIALFVSLICSFGFL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03349 492 Gene3D Acid Proteases 266 444 IPR021109 -
Mepo6g03349 492 PANTHER ASPARTYL PROTEASES 16 432 IPR001461 GO:0004190|GO:0006508
Mepo6g03349 492 Gene3D Acid Proteases 56 265 IPR021109 -
Mepo6g03349 492 PRINTS Pepsin (A1) aspartic protease family signature 312 323 IPR001461 GO:0004190|GO:0006508
Mepo6g03349 492 PRINTS Pepsin (A1) aspartic protease family signature 85 105 IPR001461 GO:0004190|GO:0006508
Mepo6g03349 492 PRINTS Pepsin (A1) aspartic protease family signature 410 425 IPR001461 GO:0004190|GO:0006508
Mepo6g03349 492 ProSiteProfiles Peptidase family A1 domain profile. 79 434 IPR033121 -
Mepo6g03349 492 CDD pepsin_A_like_plant 79 438 IPR034161 -
Mepo6g03349 492 FunFam Aspartic proteinase-like protein 2 266 445 - -
Mepo6g03349 492 Pfam Xylanase inhibitor N-terminal 79 264 IPR032861 -
Mepo6g03349 492 FunFam Aspartic proteinase-like protein 2 62 265 - -
Mepo6g03349 492 SUPERFAMILY Acid proteases 74 441 IPR021109 -
Mepo6g03349 492 Pfam Xylanase inhibitor C-terminal 282 434 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03349 Mepo-Chr6 45485163 45489819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03349 54 439 Miscellaneous Gene Families AT1G44130 27.930 9.31e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03349 - - gmx:100791299 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03349 6 45485163 45489819 Mepo6g03349 6 45485163 45489819 ECH
Mepo6g03349 6 45485163 45489819 Mepo2g01772 2 26053350 26058342 PCT