Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01772 ATGGTAACCGCCGTAATTCTGTTCACCGTCACGGTGGTTCTCTCATCGGCGTTAGCTTCATCACCGGTAACACTAACACTTGAAAGAGCTTTTCCTTCAAATCATGGAGTTGAATTGAGTCATCTTAAAGCATTGGATAGTTTTAGACATCAACGATTTTTGCAGTCTACTACTAGTTATGTTGTTAATTTTCCTGTTAAAGGATCCTTTGATACCTCTAAAGCTGGGCTTTACTTTACAAAGGTGAATTTGGGTACTCCTCCAAGAGAATTTTATGTTCAGATTGATACCGGAAGTGATGTTCTTTGGGTTAGTTGTGCTTCCTGCATTGGTTGTCCCCAAACAAGTGGTCTCCAAATTCAGCTCAATTACTTTGACCCTAGGAGTTCATCGACATCTTCGTTCATCGCTTGTTCTGACCAAAGGTGCAAGAATGGAGTACAGTCATCAGATAGCAGCTGTTCCGGTCGGAATAACCAATGCACTTACATATTCCAGTATGGAGATGGTAGTGGAACATCAGGCTATTATGTGTCAGACTTTATGCACTTTGCTAGTATTACTGAGGAATCTTTGTTGTCAAACTCCTCGGCGCCTGTGGTTTTTGGTTGTAGCAACCAGCAGAGTGGGGACTTGACAAAGTCTGATAGAGCAATCGATGGTATATTTGGATTTGGGCAACAAGGCATGTCAGTAATTTCCCAGCTCGCTTCACAAGGAATAGCACCAAGAGTTTTCTCACACTGCTTGAAAGGAGATAGTAGCGGTGGCGGCTTATTGGTTCTTGGTGAGATTGTGGAGCCAAACATAATTTATAGTCCACTCGTTCCGTCACAGCCCCATTATAATCTAAATCTTCTGAGCATCTCTGTCAATGGCCAAATTTTGCCAATTGATTCGGCTATTTTTGCTACATCAAACAATAGAGGCACCATTATTGATTCCGGAACAACTTTGGCATACATTGCCGAAGAGGCTTACGGCCCCTTTATCAATGCGATTACAGCTGCTATTCCACAATCTGTACGCACTGTTCTTTCCAGAGGAAATCAATGTTACTTAGTTACCAACAGCCTTGACAGCTTTCCTCAAGTAAGTCTGAATTTTGCTGGTGGTGCTTCTCTTGTTTTAGGAGCACAAGACTACCTTATAAAGCAGAATTATATTGGAGATGGATCAGTGTGGTGTATTGGCTTTCAGAAAATTGCCGGTCAAGATATAACAATTCTAGGAGACCTTGTATTAAAAGACAGAATTTTTGTCTATGATCTTGCTGGTCAACGCATTGGATGGGCTAACTATGACTGTTCCTTGTCGGTTAATGTTTCTGCATCATCTGGTAACGGCAGAAGTGAGTTTGTTAACGCGGGAAACATAAGTGGAAGCACTTCTTTGCGTGATGGATCTCACAAGTTGATAAAGAGAAGAGTGGTCATTGCTATATTCATGCACATAACACTAATATGCTATTTTGTATTTTTGTAG 1485 0.4128 MVTAVILFTVTVVLSSALASSPVTLTLERAFPSNHGVELSHLKALDSFRHQRFLQSTTSYVVNFPVKGSFDTSKAGLYFTKVNLGTPPREFYVQIDTGSDVLWVSCASCIGCPQTSGLQIQLNYFDPRSSSTSSFIACSDQRCKNGVQSSDSSCSGRNNQCTYIFQYGDGSGTSGYYVSDFMHFASITEESLLSNSSAPVVFGCSNQQSGDLTKSDRAIDGIFGFGQQGMSVISQLASQGIAPRVFSHCLKGDSSGGGLLVLGEIVEPNIIYSPLVPSQPHYNLNLLSISVNGQILPIDSAIFATSNNRGTIIDSGTTLAYIAEEAYGPFINAITAAIPQSVRTVLSRGNQCYLVTNSLDSFPQVSLNFAGGASLVLGAQDYLIKQNYIGDGSVWCIGFQKIAGQDITILGDLVLKDRIFVYDLAGQRIGWANYDCSLSVNVSASSGNGRSEFVNAGNISGSTSLRDGSHKLIKRRVVIAIFMHITLICYFVFL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01772 494 Gene3D Acid Proteases 50 264 IPR021109 -
Mepo2g01772 494 PRINTS Pepsin (A1) aspartic protease family signature 311 322 IPR001461 GO:0004190|GO:0006508
Mepo2g01772 494 PRINTS Pepsin (A1) aspartic protease family signature 408 423 IPR001461 GO:0004190|GO:0006508
Mepo2g01772 494 PRINTS Pepsin (A1) aspartic protease family signature 84 104 IPR001461 GO:0004190|GO:0006508
Mepo2g01772 494 PANTHER ASPARTYL PROTEASES 9 430 IPR001461 GO:0004190|GO:0006508
Mepo2g01772 494 FunFam Aspartic proteinase-like protein 2 61 264 - -
Mepo2g01772 494 Pfam Xylanase inhibitor C-terminal 281 432 IPR032799 -
Mepo2g01772 494 SUPERFAMILY Acid proteases 75 439 IPR021109 -
Mepo2g01772 494 CDD pepsin_A_like_plant 78 436 IPR034161 -
Mepo2g01772 494 FunFam Aspartic proteinase-like protein 2 265 443 - -
Mepo2g01772 494 Gene3D Acid Proteases 265 442 IPR021109 -
Mepo2g01772 494 ProSiteProfiles Peptidase family A1 domain profile. 78 432 IPR033121 -
Mepo2g01772 494 Pfam Xylanase inhibitor N-terminal 78 263 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01772 Mepo-Chr2 26053350 26058342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01772 51 437 Miscellaneous Gene Families AT1G44130 27.586 4.30e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01772 - - gmx:100789004 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03349 6 45485163 45489819 Mepo2g01772 2 26053350 26058342 PCT