Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03212 ATGGCTTCACAAAATACTCAAGTTCAATTTCAAGACTCATTACCCTTCATGGCAAACAAGCTTGGTGGGGATGGATTAATAGATGAACTATGCAATGGTTTCAATCTTTTGATGGATTCTACTAAAGGAGTCATTACTTTTGAAAGCCTTAAGAAGAATTCAGCTTTGCTTGGGTTACAAGATTTGACCGATGTGGAACTTCAATCCATGATTGTTGAAGGTGATTTTGATGGTGATGGTGCTCTTAATCAAATGGAGTTTTGTGTTTTGATGTTTAGACTTAGTCCTGAACTTATGGATGGGTCTAAGATGTGGTTGGAACAAATGCTTCAACAAGAAGTCCAAGATTCTTTCTAA 357 0.3669 MASQNTQVQFQDSLPFMANKLGGDGLIDELCNGFNLLMDSTKGVITFESLKKNSALLGLQDLTDVELQSMIVEGDFDGDGALNQMEFCVLMFRLSPELMDGSKMWLEQMLQQEVQDSF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03212 118 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Mepo6g03212 118 SMART efh_1 66 94 IPR002048 GO:0005509
Mepo6g03212 118 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Mepo6g03212 118 SUPERFAMILY EF-hand 4 91 IPR011992 -
Mepo6g03212 118 Gene3D - 7 117 - -
Mepo6g03212 118 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Mepo6g03212 118 PANTHER CALCIUM-BINDING PROTEIN KIC 7 116 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03212 Mepo-Chr6 43960856 43961698 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03212 4 113 EF-hand Containing Proteins AT4G27280 64.865 2.12e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03212 K24345 - gmx:100500465 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03212 6 43960856 43961698 Mepo6g03212 6 43960856 43961698 ECH
Mepo6g03212 6 43960856 43961698 Mepo1g02909 1 31653954 31654621 PCT