Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02909 ATGGCATCACAAAACCCACCACAGCCTCATTTCCATGATCACCTTCCTTTCATGGCCAACAAATTAGGTGGAGATGGCTTGATAGACGAACTTTGTAATGGGTTCAATCTTTTGAAGGATGCTGATAAAGGGGTCATCACTTTTGAAAGCCTGAAAATGAATTCAGCTTTGTTGGGATTAAATGGTTTCAGCGATGAAGATCTTTTGTCTATGCTAATGGAAGGTGATTTTGATGGAGATGGTGCTCTTAACCAAATGGAGTTTTGTGTCTTGATGTTTAGATTGAGCCCTGAACTTATGGAGGGCTCTAAATTGTGGTTGGAAGAGGCCCTTCAACATCAATTTTGA 348 0.4052 MASQNPPQPHFHDHLPFMANKLGGDGLIDELCNGFNLLKDADKGVITFESLKMNSALLGLNGFSDEDLLSMLMEGDFDGDGALNQMEFCVLMFRLSPELMEGSKLWLEEALQHQF 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02909 115 Coils Coil 108 115 - -
Mepo1g02909 115 PANTHER CALCIUM-BINDING PROTEIN KIC 9 114 IPR044205 GO:0005509
Mepo1g02909 115 Pfam EF-hand domain pair 43 94 IPR002048 GO:0005509
Mepo1g02909 115 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Mepo1g02909 115 Gene3D - 9 115 - -
Mepo1g02909 115 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Mepo1g02909 115 SUPERFAMILY EF-hand 11 95 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02909 Mepo-Chr1 31653954 31654621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02909 3 115 EF-hand Containing Proteins AT4G27280 64.035 1.81e-48 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02909 K24345 - gmx:100527035 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02909 1 31653954 31654621 Mepo1g02909 1 31653954 31654621 ECH
Mepo6g03212 6 43960856 43961698 Mepo1g02909 1 31653954 31654621 PCT