Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02365 ATGTCTACACTTCTTCTACCCACACCCCCTCTCCACACCTCCCTCTACCGCCGCAACACCTTATCATCATCATCGTCATCACTTCAATTTCACTCTCGCTTCTCTTTTTCATCATTTCATTCACTTCCTCAAACTCATTCAAGAAGAACATGCATTTCCCTTCGCGCTTTTGATTCTTCCTCCGACTCCAAAATCGAAGAAAAAGTTGTTCAAGAAGGTGAAAAAGTTAGAATTGCTGATGAAGATTATCCTAGTGGAGAATTTGAATTTGAACCTATCACTGGTTGGAGGAATTTCGTCGTGAAGGTTAAGATGCTCATTGCGTATCCATGGGAACGTGTTCGTAAAGGTAGCGTTCTTACAATGAAGCTTCGTGGCCAGATATCTGATCAAGCGAAGAGTAGATTCTCTCCGGGACTTTCTCTACCTCAAATATGCGAGAATTTTTTGAAAGCAGCCTATGATCCTCGAATTTCTGGGGTCTATCTCCATATTGATAGTTTAAACTGTGGTTGGGGTAAAGTAGAAGAAATTCGAAGGCACATCTTGAATTTCAAAAAATCAGGAAAATTTGTTGTGGCTTATCTCCCTACATGTCAAGAAAAAGAATATTACCTCGCATGTGCTTGTGAAGAAATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTTGGATTGAGTGTTCAAGCCTCATTCCTCAGAGGCGTTTTAGATAAAATAGGAGTTGAACCGCAAGTGGAAAGGATCGGCAAGTACAAAAGTGCAGGAGATCAATTAGCTCGAACAACCATGTCTGATGAAAATTGTGAGATGTTGACTGCATTACTAGATAATATCTATACAAACTGGCTGGATAAAGTCTCTTCTGCCAAAGGAAAAGGAAAAGAAGATATTGAGAACTTTATAAATGAAGGTGTTTATCAAGTTGATAAGCTGAAAGAAGAGGGCCTTATATCAAATTTAATGTATGATGATGAGGTTACTGACATGTTGAAGGAGAGACTTGGAGTGAAAACAGATAAAAAACTGCCAACAGTCGATTACAGGAAATACTCCCGGGTTAGGAAATGGACAGTTGGAATTTCAGGTGGCAAAGAACTGATAGCCATCATCCGGGCCTCAGGGAGCATTAGTCGAGTTAAGAGTCAATTAAGTGTCTCAGGCTCTGGCATCACTTCAGAGGAGTTCATTGAGAAGATTCGCACTGTCAGAGAGTCAAAAAAATTTAAGGCTGCTATCATCAGAATTGACAGTCCTGGAGGTGACGCTCTTGCCTCTGATTTGATGTGGAGAGAAATTCGGCTTTTAGCTGCTTCAAAACCAGTCATTGCTTCAATGGCTGATGTGGCAGCAAGTGGAGGATACTACATGGCAATGGGAACTGATGCTATTGTTGCAGAAAGTCTTACCTTAACTGGTTCAATTGGAGTAGTCACAGGAAAATTTAACCTAGCGAAACTGTATGAGAAGATTGGCTTTAATAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTCGTTTCCGCTGATCAGCGTTCTTTTAGGCCAGATGAAGCAGAGCTATTTGCCAAATCTGCGCAGAATGCATATAAACAATTTCGAGACAAGGCAGCTTTATCCAGATCTATGACTGTGGACAAGATGGAGGAGGTAGCACAGGGGAGAGTTTGGACTGGTAAAGATGCAGCATCACATGGTTTGGTTGATGCTATTGGTGGCCTTTCCCGAGCTATTGCCATAGCAAAATTGAAGGCCAATATACCTCAAGACGAACAGGTTACTGTTGTAGAGATATCTAGATCCAGTCCCTCTCTACCTGAGATTTTATTAGGCGCACGAAGTTCCCTAACCGGAGTTGAAAGCACGTTGAAGGAACTGCTACAGGGGTTGACATTTTCTGATGGAGTTCAAGCTAGGATGGATGGAATCATTTTTCGTTCATTGGAAGGATATCCCAACGACAACCCCATTTTGTCAATTATAAAAGATTATCTTAGTTCCCTGTAG 2007 0.4131 MSTLLLPTPPLHTSLYRRNTLSSSSSSLQFHSRFSFSSFHSLPQTHSRRTCISLRAFDSSSDSKIEEKVVQEGEKVRIADEDYPSGEFEFEPITGWRNFVVKVKMLIAYPWERVRKGSVLTMKLRGQISDQAKSRFSPGLSLPQICENFLKAAYDPRISGVYLHIDSLNCGWGKVEEIRRHILNFKKSGKFVVAYLPTCQEKEYYLACACEEIYAPPSAYFSLFGLSVQASFLRGVLDKIGVEPQVERIGKYKSAGDQLARTTMSDENCEMLTALLDNIYTNWLDKVSSAKGKGKEDIENFINEGVYQVDKLKEEGLISNLMYDDEVTDMLKERLGVKTDKKLPTVDYRKYSRVRKWTVGISGGKELIAIIRASGSISRVKSQLSVSGSGITSEEFIEKIRTVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMADVAASGGYYMAMGTDAIVAESLTLTGSIGVVTGKFNLAKLYEKIGFNKEIISRGRYAELVSADQRSFRPDEAELFAKSAQNAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDAASHGLVDAIGGLSRAIAIAKLKANIPQDEQVTVVEISRSSPSLPEILLGARSSLTGVESTLKELLQGLTFSDGVQARMDGIIFRSLEGYPNDNPILSIIKDYLSSL 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02365 668 CDD S49_SppA_67K_type 120 333 IPR047217 -
Mepo6g02365 668 Pfam Peptidase family S49 185 337 IPR002142 GO:0006508|GO:0008233
Mepo6g02365 668 Pfam Peptidase family S49 436 586 IPR002142 GO:0006508|GO:0008233
Mepo6g02365 668 Gene3D - 364 509 - -
Mepo6g02365 668 SUPERFAMILY ClpP/crotonase 101 323 IPR029045 -
Mepo6g02365 668 Gene3D - 258 353 - -
Mepo6g02365 668 Gene3D - 117 257 - -
Mepo6g02365 668 SUPERFAMILY ClpP/crotonase 367 573 IPR029045 -
Mepo6g02365 668 Gene3D - 510 636 - -
Mepo6g02365 668 PIRSF Protease_4_SppA 54 668 IPR004634 GO:0006465|GO:0008233|GO:0016020
Mepo6g02365 668 NCBIfam signal peptide peptidase SppA 368 581 IPR004635 GO:0006508|GO:0008233
Mepo6g02365 668 CDD S49_Sppa_N_C 368 582 IPR047272 -
Mepo6g02365 668 PANTHER PROTEASE 4 69 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02365 Mepo-Chr6 32134518 32144919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02365 K04773 - gmx:100781522 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01170 1 11428453 11433841 Mepo6g02365 6 32134518 32144919 PCT