Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01170 ATGACGAAAGGGTCAATCACATCCATACCGCAACAAGTACCCGCTTTCAAATTCCAAAGCTTTCTCAAATTATTAAAACCGCTTTTCAAATTCAAACCCTTCCAATCCCGCTCTTCTTGTTCCTCCTTATCCTCAAATCCTACTCTTAAACAAAAATCTGTCAATGGCAATGACAAAGATTATCCCACTGGTGACTTTGATTTCAAGCCAGTCACCAGCTTCAATAAATTTCTCGTCAAGCTCAAGATGCTAATAGCATTCCCTTCAGAGCGTGTTGAACACGGTAGCATCTTGAAAATCATCTTACGCGGCCAGATATCCGATCAGTTTCTGCCCCAAATTTGGGATAATTTGTTGAAAGCAGCATATGATCCTCGTATTTCTGCAGTATATCTTCATATTGATACATTATATTGTGATTGGGCTAAACTTGATGAAATTCAAAGGCAGATATTAAATTTCAGAAAATCAGGATTTTATGACTTACTTGGAATTGAACCACAAGTTGAGAGAATTGGCAAATATAAAAGTGCAGGAGATACACTAACCCATAAAACCATGTCCGAAGATAACCGTGAGGCATTGACTGCAATACTGGATAATATCTATTCAAATTGGCTGGATAAAGTCTCTTCTGCTGGAGGAAAGAAAAGAGAAGATATTGAAAAATGCATAAACGAAGGTGTGTATCAAGTAGACAGACTCAAAGAAGAGGGTTTCATAACAAGCATACTCTATGATGATGAGGTTATCACTAGGTTGAAGAAGTCAAAGAGACTTCAGGTGAAATCAAACAATCATCTGCATATGGTTTATTTCAGAAAATACTCTGGAGTTAGAAAATGGACTGTTGGAATATCAGGTGGTAAAGAAATGATAGCCGTCATCCGAGCCTCAGGGACCATCAATCGTGTTGGTGGCAAAGCGTCAAAAAAATTCAAGGCTGCTGTTATCCGAATTGACAGTCCAGGAGGTGATGCACTTGCTTCTGATTTAATGTGGAGAGAAATCAGGCTTCTTGCTGCCAAAAAACCAGTCGTTGCTTCATTGTCTGATAAGGCCGCAAGTGGAGGATACTATATGGCAATGGGAGCAGATGTCATTGTTGCAGAAAATCTTACCTTAACCGGTTCGATTGGAGTGATCATGAAAAAATTTAACTATGAGAAACGTCATAAGAGGATTGGTTTCAACAAAGAAGTTATATCAAGGGGTAAATATGCCGAGCTCTTTGAAGCTGATCATCGTTCTTTTAGGCCACATGAAGCAGAGCTATTTGCCAAGAGAACAGAAAATGCTTATAAACAATTTCGAGACAAAGCTGCCCTGTCTAGATCAATGACTGTAGACAAGATGGAAGAGGTTGCACAGGGGAGGGTTTGGACCGGTAAGGATGCAGTATCTCATGGTTTGGTTGATGCTATTGGTGGGTTATCTCGTGCTATTGCTATAGCCAAATTGAAGGCCAATATACCTCAAGACAGTCAGGTTACCGTTGTGGAGCTCTCAAGTCCCAGTTCTACTCCACCCGCGATTTTAAGCAATCAAGGCAATTATCTTGCTGGAGCAGACCGAACATTTAAGGAACTGCTACAGGACTCGGCATTTTCTGATGAAGTTCAAGCGCGGATGGATGGAACCATGTTTCAGAATTTGGATGAATATCCATCGACCAACCCCATTTTGGGATTGATGAATGATTACCTAGAGGGAGGAGAGATTTTCTTTATGGTATAG 1737 0.403 MTKGSITSIPQQVPAFKFQSFLKLLKPLFKFKPFQSRSSCSSLSSNPTLKQKSVNGNDKDYPTGDFDFKPVTSFNKFLVKLKMLIAFPSERVEHGSILKIILRGQISDQFLPQIWDNLLKAAYDPRISAVYLHIDTLYCDWAKLDEIQRQILNFRKSGFYDLLGIEPQVERIGKYKSAGDTLTHKTMSEDNREALTAILDNIYSNWLDKVSSAGGKKREDIEKCINEGVYQVDRLKEEGFITSILYDDEVITRLKKSKRLQVKSNNHLHMVYFRKYSGVRKWTVGISGGKEMIAVIRASGTINRVGGKASKKFKAAVIRIDSPGGDALASDLMWREIRLLAAKKPVVASLSDKAASGGYYMAMGADVIVAENLTLTGSIGVIMKKFNYEKRHKRIGFNKEVISRGKYAELFEADHRSFRPHEAELFAKRTENAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDAVSHGLVDAIGGLSRAIAIAKLKANIPQDSQVTVVELSSPSSTPPAILSNQGNYLAGADRTFKELLQDSAFSDEVQARMDGTMFQNLDEYPSTNPILGLMNDYLEGGEIFFMV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01170 578 PANTHER PROTEASE 4 52 158 - -
Mepo1g01170 578 CDD S49_Sppa_N_C 293 486 IPR047272 -
Mepo1g01170 578 Gene3D - 288 416 - -
Mepo1g01170 578 Gene3D - 91 160 - -
Mepo1g01170 578 Gene3D - 431 554 - -
Mepo1g01170 578 SUPERFAMILY ClpP/crotonase 93 246 IPR029045 -
Mepo1g01170 578 Pfam Peptidase family S49 158 260 IPR002142 GO:0006508|GO:0008233
Mepo1g01170 578 Pfam Peptidase family S49 340 490 IPR002142 GO:0006508|GO:0008233
Mepo1g01170 578 MobiDBLite consensus disorder prediction 36 57 - -
Mepo1g01170 578 PIRSF Protease_4_SppA 158 571 IPR004634 GO:0006465|GO:0008233|GO:0016020
Mepo1g01170 578 PIRSF Protease_4_SppA 41 162 IPR004634 GO:0006465|GO:0008233|GO:0016020
Mepo1g01170 578 Gene3D - 183 278 - -
Mepo1g01170 578 SUPERFAMILY ClpP/crotonase 286 477 IPR029045 -
Mepo1g01170 578 NCBIfam signal peptide peptidase SppA 308 485 IPR004635 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01170 Mepo-Chr1 11428453 11433841 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01170 K04773 - gmx:100809623 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01170 1 11428453 11433841 Mepo1g01170 1 11428453 11433841 ECH
Mepo1g01170 1 11428453 11433841 Mepo6g02365 6 32134518 32144919 PCT