Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01934 ATGGCTAGTCTTACCCGTTCAACTTCTCTTCGTGAGAGGTTTGATGAATCTCTCACTGCTCACAGGATTGAAATTTTGGCCCTTTTGTCAAGGATTGAAGCAAAGGGGAAGGGAATCCTACAACACCATCAAGTCATTGCTGAGTTTGAAGAAATCCCTGAGGAGAAAAGACAAAAACTAGTTAATGGAGCCTTTGGAGAAGTTTTGAGATCTACTCAGGAAGCTGTAGTGTTACCACCATTTGTTGCTCTTGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGTATCTGAGAGTTGATGTGCACAGCCTTGTTGTCGATGAACTTCGTGCTGCCGAGTATCTCAAGTTCAAGGAGGAACTTGTTGAAGGAAGTTCTAATGGCAACTTTGTGCTTGAGTTGGACTTTGAACCATTCAACGCCTCTTTTCCTCGTCCAACTCTGAACAAGTCGATTGGAAATGGTGTCGAGTTCCTCAATCGCCATCTTTCTGCGAAGCTTTTCCATGGCAAAGAAAGTTTGAAGCCACTGCTGGAATTCCTCAGGCTGCACAACTATAATGGGAAGACTATGATGGTGAATGACAGAATTCAAAATCTGAATTCACTTCAACATGTTTTGAGAACTGCAGAAGATTATCTTCGCACAATTGCTCCCGAAACACCCTACTCGGAATTTGAACACAAATTCCAGGATAGTGGTTTGGAGAGAGGGTGGGGAGACACGGCCGAGCGTGTCCTCGAAATGATCCAGCTTCTGTTAGATCTTCTCGAGGCACCAGATCCTTTCACCCTCGAGAAATTCCTTGGAAGAATCCCTATGGTCTTTAATGTTGTCATCCTTTCTCCACATGGTTACTTCGCCCAAGATAATGTCTTGGGGTACCCTGATACCGGTGGACAGGTTGTGTACATTTTGGACCAAGTTCGTGCTTTGGAGAACGAGATGCTCAGACGTATCAAGCAACAAGGCTTGGACATCAAGCCTCGCATTCTCATTATCACCCGTCTTCTCCCTGATGCAGTGGGAACTACTTGTGGTGAACGTCTTGAGAAAGTATACGATACCGAACATTGCCACATTCTTCGAGTTCCATTTAGAACAGAGAAGGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCCTACCTAGAGACTTTCAGTGAGGATGTTGCCAATGAACTTGCAAAGGAGTTGGAAGGAAAACCTGATCTGATCGTCGGAAACTACAGCGACGGAAACATCGTTGCTTCTTTGTTAGCTCATAAATTAGGCGTAACTCAGTGTACTATTGCTCATGCACTTGAGAAGACCAAGTATCCAGAGTCTGAACTTTACTGGAAAAAATTCGAAGACAAGTATCACTTCTCATGCCAATTTACCGCTGATCTTTTTGCAATGAACCACACAGATTTTATCATCACAAGTACCTTCCAAGAGATTGCTGGAAGCAAGGATACTGTTGGCCAGTATGAGAGTCACACTGCCTTCACCCTTCCCGGACTTTACCGTGTTGTTCACGGTATCGATGTTTTTGATCCAAAGTTCAACATTGTCTCACCCGGAGCTGATATGAACATTTACTTCCCGTACACTGAAACTGAGCGTAGATTGACATCATTCCACCCTGAGATTGAAGAACTTCTTTACAGCTCAGTGGAGAATGAGGAGCACATATGTGTGTTGAAGGACCGCAGCAAGCCAATTATCTTCACAATGGCAAGGCTGGACCGAGTGAAGAACATTACAGGACTTGTTGAGTGGTACGGCAAGAACGCTCGCCTGAGGGAGCTAGTAAACCTTGTCGTCGTTGCTGGAGACAGGAGGAAGGAATCCAAGGACTTAGAAGAGAAGGCCGAGATGAAGAAAATGTATGGCCTAATTGAGACCTACAAATTGAACGGCCAATTCAGATGGATTTCCTCACAAATGAACCGAATTCGGAACGGAGAGCTTTACCGTGTCATTTGTGACACAAAAGGTGCATTTGTGCAGCCTGCTATTTATGAAGCTTTTGGTTTGACTGTTGTTGAAGCTATGACTTGTGGATTGCCAACATTTGCAACATGCAATGGTGGTCCTGCTGAGATCATTGTTCATGGAAAATCTGGTTACCATATTGATCCTTATCATGGTGACCAAGCTGCTGAGACTCTTGTTGAATTCTTTGAGAAGAGTAAGGCTGATCCATCTTATTGGGACAAAATCTCTCATGGAGGTCTGAAACGTATTCATGAGAAGTACACATGGCAGATTTATTCTGACAGGCTTTTGACTCTAACTGGTGTCTATGGTTTCTGGAAGCATGTGACCAATCTTGATCGTCGTGAGAGCAAACGTTACCTTGAGATGTTCTATGCACTTAAGTACAGCAAATTGGCTGAGTCTGTGCCTCTTGCTGTTGAAGAGTAA 2415 0.4427 MASLTRSTSLRERFDESLTAHRIEILALLSRIEAKGKGILQHHQVIAEFEEIPEEKRQKLVNGAFGEVLRSTQEAVVLPPFVALAVRPRPGVWEYLRVDVHSLVVDELRAAEYLKFKEELVEGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHGKESLKPLLEFLRLHNYNGKTMMVNDRIQNLNSLQHVLRTAEDYLRTIAPETPYSEFEHKFQDSGLERGWGDTAERVLEMIQLLLDLLEAPDPFTLEKFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLRRIKQQGLDIKPRILIITRLLPDAVGTTCGERLEKVYDTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETFSEDVANELAKELEGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESELYWKKFEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMNIYFPYTETERRLTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRIRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYHGDQAAETLVEFFEKSKADPSYWDKISHGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYSKLAESVPLAVEE 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01934 804 Gene3D - 144 273 - -
Mepo6g01934 804 Pfam Glycosyl transferases group 1 562 733 IPR001296 GO:0016757
Mepo6g01934 804 PANTHER - 5 802 IPR012820 GO:0005985|GO:0016157
Mepo6g01934 804 FunFam Sucrose synthase 9 143 - -
Mepo6g01934 804 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 293 761 - -
Mepo6g01934 804 Gene3D Glycogen Phosphorylase B; 278 793 - -
Mepo6g01934 804 FunFam Sucrose synthase 278 546 - -
Mepo6g01934 804 Gene3D - 23 143 - -
Mepo6g01934 804 Pfam Sucrose synthase 6 551 IPR000368 GO:0005985|GO:0016157
Mepo6g01934 804 NCBIfam sucrose synthase 24 800 IPR012820 GO:0005985|GO:0016157
Mepo6g01934 804 FunFam Sucrose synthase 144 273 - -
Mepo6g01934 804 Gene3D Glycogen Phosphorylase B; 525 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01934 Mepo-Chr6 22572511 22578590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01934 4 804 Glycosyltransferase AT3G43190 83.021 0.0 1409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01934 K00695 - gmx:100819730 1486.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01934 6 22572511 22578590 Mepo6g01934 6 22572511 22578590 ECH
Mepo1g00542 1 5190215 5195524 Mepo6g01934 6 22572511 22578590 PCT